HHsearch alignment for GI: 254780263 and conserved domain: cd04122

>cd04122 Rab14 Rab14 subfamily. Rab14 GTPases are localized to biosynthetic compartments, including the rough ER, the Golgi complex, and the trans-Golgi network, and to endosomal compartments, including early endosomal vacuoles and associated vesicles. Rab14 is believed to function in both the biosynthetic and recycling pathways between the Golgi and endosomal compartments. Rab14 has also been identified on GLUT4 vesicles, and has been suggested to help regulate GLUT4 translocation. In addition, Rab14 is believed to play a role in the regulation of phagocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GT
Probab=98.77  E-value=1.7e-08  Score=71.75  Aligned_cols=143  Identities=17%  Similarity=0.151  Sum_probs=81.9

Q ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEEEECC--CEEEEEEECCCCHHHHHHHHH
Q ss_conf             799999046898878999999876444200131268686986292063789998219--908999847873024677987
Q gi|254780263|r   13 LGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDIDSAPEEKLRGITIATAHVSYETD--KRFYSHIDCPGHADYVKNMIT   90 (392)
Q Consensus        13 ~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~D~~~~E~~rGiTi~~~~~~~~~~--~~~i~iiD~PGH~~f~~~mi~   90 (392)
T Consensus         3 ~KivlvGd~~VGKTsli~r~~~~------------~f~~~~~~Tig~~~~~k~i~~~~~~~~l~iwDtaG~e~~~~~~~~   70 (166)
T cd04122           3 FKYIIIGDMGVGKSCLLHQFTEK------------KFMADCPHTIGVEFGTRIIEVNGQKIKLQIWDTAGQERFRAVTRS   70 (166)
T ss_pred             EEEEEECCCCCCHHHHHHHHHCC------------CCCCCCCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCHH
T ss_conf             99999999995799999999129------------889999997446889999999999999999989998544425211


Q ss_pred             HHHCCCCEEEEECCCCCC-CCCHHHHHHHHHHC---CCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEEEEEEEEEEECC
Q ss_conf             740023314520123443-32106778888631---87602331002333561222110123210011101453221023
Q gi|254780263|r   91 GATQADGAILVCAAEDGP-KPQTREHILLARQI---GISSIVVYMNKVDAVDDDELLDISEYEIRDLLKEHKYSDDTPII  166 (392)
Q Consensus        91 g~~~~D~ailvVda~~G~-~~QT~eh~~l~~~l---gi~~iIv~iNKmD~v~~~~~~~~i~~~i~~~l~~~~~~~~~pii  166 (392)
T Consensus        71 ~~~~a~~~ilvydvt~~~Sf~~l~~w~~~~~~~~~~~~~-iilVGNK~DL~~~r~---V~~~e~~~~a~~~----~~~~~  142 (166)
T cd04122          71 YYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTV-IFLIGNKADLEAQRD---VTYEEAKQFADEN----GLLFL  142 (166)
T ss_pred             HEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCE-EEECCCCCCHHHCCC---CCHHHHHHHHHHC----CCEEE
T ss_conf             143154659972587476799999999999985699975-870340157444389---9999999999986----99899


Q ss_pred             CCEEEEEEE
Q ss_conf             311467641
Q gi|254780263|r  167 RGSALCALQ  175 (392)
Q Consensus       167 ~~sa~~g~~  175 (392)
T Consensus       143 E~SAk~g~n  151 (166)
T cd04122         143 ECSAKTGEN  151 (166)
T ss_pred             EECCCCCCC
T ss_conf             986587808