HHsearch alignment for GI: 254780263 and conserved domain: pfam03308
>pfam03308 ArgK ArgK protein. The ArgK protein acts as an ATPase enzyme and as a kinase, and phosphorylates periplasmic binding proteins involved in the LAO (lysine, arginine, ornithine)/AO transport systems.
Probab=98.41 E-value=5.6e-07 Score=62.32 Aligned_cols=171 Identities=18% Similarity=0.142 Sum_probs=94.1
Q ss_pred HCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCC---------------CCCHHH---HHCCCEEEEEEE----
Q ss_conf 1038827999990468988789999998764442001312---------------686869---862920637899----
Q gi|254780263|r 7 VRNKESLGLSTIGHVDHGKTTLTAAITKYYSEEKKEYGDI---------------DSAPEE---KLRGITIATAHV---- 64 (392)
Q Consensus 7 ~~~k~~~ni~~iGhvd~GKSTL~~~L~~~~~~~~~~~~~~---------------D~~~~E---~~rGiTi~~~~~---- 64 (392)
T Consensus 24 ~~~g~a~~iGiTG~PGaGKStli~~l~~~~~~~g~~vaVlAvDPSS~~sgGaiLGDr~RM~~~~~~~~vfiRs~~srg~l 103 (267)
T pfam03308 24 PLTGRAHRVGITGVPGAGKSTLIEALGMELRRRGHRVAVLAVDPSSPFTGGSILGDRTRMQRLAVDPGAFIRSSPSRGAL 103 (267)
T ss_pred HHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 43599559987689988799999999999996898689999789998888630010777765058998588645778888
Q ss_pred ------------EEECCCEEEEEEECCCCHHHHHHH-HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEE
Q ss_conf ------------982199089998478730246779-8774002331452012344332106778888631876023310
Q gi|254780263|r 65 ------------SYETDKRFYSHIDCPGHADYVKNM-ITGATQADGAILVCAAEDGPKPQTREHILLARQIGISSIVVYM 131 (392)
Q Consensus 65 ------------~~~~~~~~i~iiD~PGH~~f~~~m-i~g~~~~D~ailvVda~~G~~~QT~eh~~l~~~lgi~~iIv~i 131 (392)
T Consensus 104 GGls~~t~~~i~lleaaGfD~IivETVGV----GQsE~~v~~~aD~~llv~~Pg~GDeiQ~----iKaGImEiaDi~-vV 174 (267)
T pfam03308 104 GGLSRATREAILLLDAAGFDVIIIETVGV----GQSEVDIANMADTFVLVTIPGGGDDLQG----IKAGLMEIADIY-VV 174 (267)
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCC----CCCCHHHHHHCCEEEEEECCCCCHHHHH----HHHHHHHHCCEE-EE
T ss_conf 87147699999999977999999924777----7530355541576899955887608889----875376535489-99
Q ss_pred CCCCCCCCHHHHHHCCCCCCEEEEE--EEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHH
Q ss_conf 0233356122211012321001110--145322102331146764114445652123320344
Q gi|254780263|r 132 NKVDAVDDDELLDISEYEIRDLLKE--HKYSDDTPIIRGSALCALQGTNKELGEDSIHALMKA 192 (392)
Q Consensus 132 NKmD~v~~~~~~~~i~~~i~~~l~~--~~~~~~~pii~~sa~~g~~~~n~~~~~~~~~~Ll~~ 192 (392)
T Consensus 175 NKaD~~~A~~~~~~l~~~l-~l~~~~~~~W--~p~Vl~tSA~~g---~Gi~el~~~I~~~~~~ 231 (267)
T pfam03308 175 NKADLPGAERTARELRSAL-HLLTPKEAGW--RPPVLTTSAVTG---EGIDELWDAIEEHREF 231 (267)
T ss_pred ECCCHHHHHHHHHHHHHHH-HCCCCCCCCC--CCCEEEEECCCC---CCHHHHHHHHHHHHHH
T ss_conf 6676476999999999998-5179877899--999899874788---9999999999999999