HHsearch alignment for GI: 254780264 and conserved domain: COG1100
>COG1100 GTPase SAR1 and related small G proteins [General function prediction only].
Probab=98.56 E-value=4.8e-07 Score=63.95 Aligned_cols=117 Identities=21% Similarity=0.216 Sum_probs=77.2
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEE-EECCCCCCCEEEEEEECC
Q ss_conf 5279998687889778999999980873214220179561378088987085376407999-960777871389998179
Q gi|254780264|r 10 SRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTV-FWPGRDGGQKKLTIIDTP 88 (701)
Q Consensus 10 iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl-~~~~~~~~~~~iNlIDTP 88 (701)
T Consensus 5 ~~kivv~G~~g~GKTtl~~~l~~~~--~~~---~~---------------~~t~~~~~~~~~~~~~--~~~~~~~~~Dt~ 62 (219)
T COG1100 5 EFKIVVLGDGGVGKTTLLNRLVGDE--FPE---GY---------------PPTIGNLDPAKTIEPY--RRNIKLQLWDTA 62 (219)
T ss_pred EEEEEEECCCCCCHHHHHHHHHCCC--CCC---CC---------------CCCEEECCCCCEEECC--CCCEEEEEEECC
T ss_conf 2799999999998899999996476--765---56---------------7614540432036226--660026767679
Q ss_pred CCCCCHHHHHHHHHHHCEEEEEEECC--CCCCHHHHHHHHHHHHC---CCCEEEEECCCCCCCCC
Q ss_conf 87552899999998604569999558--88883479999999873---99789998176765875
Q gi|254780264|r 89 GHVDFTMEVERSIRVTDGAIALLDSN--AGVEPQTETVWRQADKY---SVPRVIFCNKMDKMGAD 148 (701)
Q Consensus 89 GH~DF~~Ev~~aL~~~DgailvVDa~--eGv~~qT~~vlr~~~~~---~lp~ilvINKiDr~~~d 148 (701)
T Consensus 63 gq~~~~~~~~~y~~~~~~~l~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~iilv~nK~Dl~~~~ 127 (219)
T COG1100 63 GQEEYRSLRPEYYRGANGILIVYDSTLRESSDELTEEWLEELRELAPDDVPILLVGNKIDLFDEQ 127 (219)
T ss_pred CHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
T ss_conf 86999998875043897899999762056578899999999987466886799969761055430