HHsearch alignment for GI: 254780264 and conserved domain: COG5192
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis].
Probab=98.34 E-value=6.3e-06 Score=56.79 Aligned_cols=118 Identities=20% Similarity=0.275 Sum_probs=84.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf 79998687889778999999980873214220179561378088987085376407999960777871389998179875
Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV 91 (701)
Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~ 91 (701)
T Consensus 71 IvavvGPpGtGKsTLirSlVrr---------------~tk~ti~~i~GPiTvvsg-----------K~RRiTflEcp--~ 122 (1077)
T COG5192 71 IVAVVGPPGTGKSTLIRSLVRR---------------FTKQTIDEIRGPITVVSG-----------KTRRITFLECP--S 122 (1077)
T ss_pred EEEEECCCCCCHHHHHHHHHHH---------------HHHHHHHCCCCCEEEEEC-----------CEEEEEEEECH--H
T ss_conf 8996369988746899999999---------------877542036786478615-----------63578988671--7
Q ss_pred CCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCHHHHHHHHCCCC
Q ss_conf 52899999998604569999558888834799999998739978999-8176765875555666411110
Q gi|254780264|r 92 DFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIF-CNKMDKMGADFYRSVEMISSRL 160 (701)
Q Consensus 92 DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilv-INKiDr~~~d~~~~l~~i~~~l 160 (701)
T Consensus 123 D-l~~miDvaKIaDLVlLlIdgnfGfEMETmEFLnil~~HGmPrvlgV~ThlDlfk~--~stLr~~KKrl 189 (1077)
T COG5192 123 D-LHQMIDVAKIADLVLLLIDGNFGFEMETMEFLNILISHGMPRVLGVVTHLDLFKN--PSTLRSIKKRL 189 (1077)
T ss_pred H-HHHHHHHHHHHHEEEEEECCCCCCEEHHHHHHHHHHHCCCCCEEEEEEECCCCCC--HHHHHHHHHHH
T ss_conf 8-8888768875213578863666704248899999866489724788862113358--37899999887