HHsearch alignment for GI: 254780264 and conserved domain: KOG0087

Probab=95.37  E-value=0.15  Score=28.70  Aligned_cols=118  Identities=18%  Similarity=0.188  Sum_probs=73.6

Q ss_pred             HHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEE
Q ss_conf             10252799986878897789999999808732142201795613780889870853764079999607778713899981
Q gi|254780264|r    7 IEDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIID   86 (701)
Q Consensus         7 ~e~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlID   86 (701)
T Consensus        11 ~dylFKiVliGDS~VGKsnLlsRftrn--EF----~~~SksTI----------Gvef~t~t--~~---vd~k~vkaqIWD   69 (222)
T KOG0087          11 YDYLFKIVLIGDSAVGKSNLLSRFTRN--EF----SLESKSTI----------GVEFATRT--VN---VDGKTVKAQIWD   69 (222)
T ss_pred             CCEEEEEEEECCCCCCHHHHHHHHCCC--CC----CCCCCCCE----------EEEEEEEE--EE---ECCCEEEEEEEC
T ss_conf             553789999578765536778774335--46----75666624----------68877500--23---568178876532


Q ss_pred             CCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHH-HHHHHHHHH---CCCCEEEEECCCCCC
Q ss_conf             79875528999999986045699995588888347-999999987---399789998176765
Q gi|254780264|r   87 TPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQT-ETVWRQADK---YSVPRVIFCNKMDKM  145 (701)
Q Consensus        87 TPGH~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT-~~vlr~~~~---~~lp~ilvINKiDr~  145 (701)
T Consensus        70 TAGQERyrAitSaYYrgAvGAllVYDITr~~Tfenv~rWL~ELRdhad~nIvimLvGNK~DL~  132 (222)
T KOG0087          70 TAGQERYRAITSAYYRGAVGALLVYDITRRQTFENVERWLKELRDHADSNIVIMLVGNKSDLN  132 (222)
T ss_pred             CCCHHHHCCCCCHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHH
T ss_conf             611456500111221344036999950467788889999999985588771799961220454