HHsearch alignment for GI: 254780264 and conserved domain: PRK00741

>PRK00741 prfC peptide chain release factor 3; Provisional.
Probab=100.00  E-value=0  Score=829.16  Aligned_cols=456  Identities=27%  Similarity=0.419  Sum_probs=390.0

Q ss_pred             CCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEE----CCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCE
Q ss_conf             671025279998687889778999999980873214220----1795613780889870853764079999607778713
Q gi|254780264|r    5 CKIEDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEV----HDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQK   80 (701)
Q Consensus         5 ~~~e~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v----~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~   80 (701)
T Consensus         5 ~ei~~~RniaIi~H~dAGKTTLtE~lL~~~GaI~~~G~V~~~~~~~~~~sD~~~~E~~RgiSI~ssv~~~e~~-----~~   79 (526)
T PRK00741          5 QEVAKRRTFAIISHPDAGKTTLTEKLLLFGGAIQEAGTVKGRKSGRHATSDWMEMEKQRGISVTSSVMQFPYR-----DC   79 (526)
T ss_pred             HHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHCCCEEECCEEEEEEC-----CE
T ss_conf             6876117799993789898999999997467524484663146788646788588997596486151778678-----98


Q ss_pred             EEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             89998179875528999999986045699995588888347999999987399789998176765875555666411110
Q gi|254780264|r   81 KLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRL  160 (701)
Q Consensus        81 ~iNlIDTPGH~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~~~d~~~~l~~i~~~l  160 (701)
T Consensus        80 ~iNliDTPGh~DF~~e~~raL~a~D~Av~Vida~~GVe~qTe~~w~~~~~~~iP~i~FINKmDR~~ad~~~~l~ei~~~l  159 (526)
T PRK00741         80 LINLLDTPGHEDFSEDTYRTLTAVDSALMVIDAAKGVEPQTRKLMEVCRLRDTPIFTFINKLDRDGREPLELLDEIEEVL  159 (526)
T ss_pred             EEEEEECCCCHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf             99999098946778999999987375999997775523336899999886399889999656767898789887788874


Q ss_pred             CCCCCEECCCCCCCCCCCEEEEEHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             26833000234555665302442234431145222698513874004317889999998863002345789998632778
Q gi|254780264|r  161 GANPLVIQLPVGSESNFQGVIDLVEMKALLWKNEDLGSSWDVVEIPEDMKDSANSYRDKMIESIVELDDSAMDSYLQGES  240 (701)
Q Consensus       161 ~~~~~~~~~p~~~~~~~~g~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lle~i~~~dd~~~~~~l~~~~  240 (701)
T Consensus       160 g~~~~p~~~Pig~g~~F~GvvDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------~~~~~~~~ee~e  229 (526)
T PRK00741        160 GIACAPITWPIGMGKRFKGVYDLYNDEVELYQPGHGHTIQEFEIIKGLDNPEL---DEALG-------EDLAEQLREELE  229 (526)
T ss_pred             CCCCEEEEEECCCCCCEEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCHHH---HHHHH-------HHHHHHHHHHHH
T ss_conf             78736888303678860378880138799803677884046605877877899---98753-------899997553577


Q ss_pred             CCHHHHHHHHCCEEECCEEEECCCCCEECCCCHHHHHHHHHHHCCCHHHEECCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf             99889873000003101003234310001221024889898717862130001222245675210112345654201033
Q gi|254780264|r  241 FSSDRIRSLIRLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSPLDVRAIKGVDVKSNSEIDVSAVDSSPLSMLAFK  320 (701)
Q Consensus       241 ~~~~~l~~~l~~~~~~~~~~pv~~gsa~~~~Gv~~LLd~i~~~lPsP~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~v~K  320 (701)
T Consensus       230 l~~~~~~~~d~~~~~~G~l~PVf~GSA~~n~GV~~LLd~iv~~~PsP~~r~~~~~---------~v~-p~~~~fsa~VFK  299 (526)
T PRK00741        230 LVQGASNEFDLEAFLAGELTPVFFGSALNNFGVQEFLDAFVEWAPAPQPRQTDER---------VVE-PTEEKFSGFVFK  299 (526)
T ss_pred             HHHCCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCC---------CCC-CCCCCCCEEEEE
T ss_conf             7731555106899973980289962000365699999999997799877777765---------447-877774359999


Q ss_pred             CCC--CC-CCCCEEHHHHHCCCCCCCCEEEEECCCCCCEEHHHHHHHCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             211--65-467100001101334568368983265541110453210474454200356732641387444321101277
Q gi|254780264|r  321 VMA--DS-FVGSLTFCRIYSGKISKGDSLLNTVKGKKERVGRMLQMHSNSREDIDEAYCGDIIALAGLKETTTGDTLCDP  397 (701)
Q Consensus       321 ~~~--d~-~~G~~a~~RV~SGtL~~gd~i~~~~~~~~~kV~~l~~~~g~~~~~v~~a~aGdIv~I~Gl~~~~~gdTl~~~  397 (701)
T Consensus       300 iqanmDP~h~griaf~RV~SG~l~~g~~v~n~r~gk~eri~~l~~~~g~~r~~V~ea~AGDIvgl~~~~~~~tGDTL~~~  379 (526)
T PRK00741        300 IQANMDPKHRDRIAFMRVCSGKFEKGMKVRHVRTGKDVRISNALTFMAQDREHVEEAYAGDIIGLHNHGTIQIGDTFTEG  379 (526)
T ss_pred             EEECCCCCCCCEEEEEEEEEEEECCCCEEEECCCCCEEEHHHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCCCEECCC
T ss_conf             98403754254379999751188579989852579536632677874435235138769989997166630037552068


Q ss_pred             CCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf             88410156636652135777615643220257888854102742014450457546876066478999999987411133
Q gi|254780264|r  398 SRPIVLERMDFPEPVIQIAIEPKSKGDQERMSLALSRLVAEDPSLRVSMDPNSGQTNLSGMGELHLEIIVDRMLREFKVD  477 (701)
Q Consensus       398 ~~~~~~~~~~~~~Pvv~vaIep~~~~d~~kL~~~L~~L~~~Dp~l~v~~~~etGE~il~g~GElhLev~l~~L~~~f~ie  477 (701)
T Consensus       380 ~-~l~~~~Ip~f~P~~~~~v~~~~~~~~kkl~~gL~~L~EEd~~-~v~~~~~t~e~il~gmGeLHlEVv~~RLk~eygVe  457 (526)
T PRK00741        380 E-KLKFTGIPNFAPELFRRVRLKNPLKQKQLQKGLVQLSEEGAV-QVFRPLSNNDLILGAVGQLQFEVVAHRLKNEYNVE  457 (526)
T ss_pred             C-CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCE-EEEECCCCCCEEEEEECHHHHHHHHHHHHHHHCCE
T ss_conf             8-521068899997557998879888899999999985547866-98873889988999716889999999998873972


Q ss_pred             CEECCCCCCC
Q ss_conf             2010541011
Q gi|254780264|r  478 ANVGAPYVSY  487 (701)
Q Consensus       478 i~vs~P~V~y  487 (701)
T Consensus       458 v~~e~~~~~~  467 (526)
T PRK00741        458 AIYEPVGVAT  467 (526)
T ss_pred             EEECCCCEEE
T ss_conf             8971574379