HHsearch alignment for GI: 254780264 and conserved domain: PRK03003

Probab=99.60  E-value=3.8e-14  Score=109.54  Aligned_cols=118  Identities=23%  Similarity=0.320  Sum_probs=87.8

Q ss_pred             CCHHHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEE
Q ss_conf             67102527999868788977899999998087321422017956137808898708537640799996077787138999
Q gi|254780264|r    5 CKIEDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTI   84 (701)
Q Consensus         5 ~~~e~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNl   84 (701)
T Consensus        33 ~~~~~lPiVaIvGRPNVGKStLFNrL~~~~~AI-----V~d------~p------GvTRDr~~~~~~~~-----~~~f~l   90 (474)
T PRK03003         33 EASGPLPVVAVVGRPNVGKSTLVNRILGRREAV-----VED------IP------GVTRDRVSYDAEWN-----GRRFVV   90 (474)
T ss_pred             CCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEE-----ECC------CC------CCCCCCEEEEEEEC-----CCEEEE
T ss_conf             667999989998999988899999986886388-----059------89------98808636899999-----928999


Q ss_pred             EECCCCCC----C----HHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             81798755----2----899999998604569999558888834799999998739978999817676
Q gi|254780264|r   85 IDTPGHVD----F----TMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDK  144 (701)
Q Consensus        85 IDTPGH~D----F----~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr  144 (701)
T Consensus        91 vDTgG~~~~~~~~~~~i~~q~~~ai~eaD~IlfVvD~~~glt~~D~eia~~LRk~~kpviLVvNK~D~  158 (474)
T PRK03003         91 QDTGGWEPDAKGLQALVAEQAEVAMRTADAVLFVVDATVGATATDEAVARLLRRSGKPVFLAANKVDS  158 (474)
T ss_pred             EECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC
T ss_conf             97999999747899999999999998699999999689898878999999987539977998675566