HHsearch alignment for GI: 254780264 and conserved domain: PRK09435
>PRK09435 arginine/ornithine transport system ATPase; Provisional.
Probab=97.66 E-value=0.0011 Score=42.38 Aligned_cols=145 Identities=20% Similarity=0.150 Sum_probs=83.4
Q ss_pred HEEEEEEECCCCCCHHHHHHHHHHHC-CCCCCC--------CEECCCCEECCCHHH---HHHHCCCEEEEEEEEEECCCC
Q ss_conf 25279998687889778999999980-873214--------220179561378088---987085376407999960777
Q gi|254780264|r 9 DSRNFGIMAHIDAGKTTTTERILYYA-GKSHKI--------GEVHDGSATMDWMEQ---EQERGITITSASTTVFWPGRD 76 (701)
Q Consensus 9 ~iRNv~iiaHvd~GKTTL~d~LL~~~-g~i~~~--------g~v~~g~~~~D~~~~---E~eRgITi~ss~~sl~~~~~~ 76 (701)
T Consensus 48 ~a~~iGiTG~pG~GKStli~~l~~~~~~~g~~v~vlavDPsS~~sgGaiLGDr~Rm~~~~~~~~~fiRs~~srg~lgg~~ 127 (325)
T PRK09435 48 NALRIGITGVPGVGKSTFIEALGMHLIEQGHKVAVLAVDPSSTRTGGSILGDKTRMERLSRHPNAFIRPSPSSGTLGGVA 127 (325)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 82599742799986889999999999967985899997899998886101038888761479984884067788867733
Q ss_pred -----------CCCEEEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
Q ss_conf -----------871389998179875528999999986045699995588888347999999987399789998176765
Q gi|254780264|r 77 -----------GGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKM 145 (701)
Q Consensus 77 -----------~~~~~iNlIDTPGH~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~ 145 (701)
T Consensus 128 ~~~~~~~~~~~a~g~d~i~iETvGvG--Q~e~~v-~~~~d~~~~~~~p~~GD~~Q~~K----~GImEiaDi~vVNKaDgd 200 (325)
T PRK09435 128 RKTRETMLLCEAAGFDVILVETVGVG--QSETAV-AGMVDFFLLLQLPGAGDELQGIK----KGIMELADLIVINKADGD 200 (325)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCC--HHHHHH-HHHCCEEEEEECCCCCCHHHHHH----HHHHHHCCEEEEECCCCC
T ss_conf 54999999999779998999706777--148899-87426688883588760889988----657750426899776755
Q ss_pred CCC-HHHHHHHHCCCC
Q ss_conf 875-555666411110
Q gi|254780264|r 146 GAD-FYRSVEMISSRL 160 (701)
Q Consensus 146 ~~d-~~~~l~~i~~~l 160 (701)
T Consensus 201 ~~~~A~~t~~e~~~aL 216 (325)
T PRK09435 201 NHTAARRAAAEYRSAL 216 (325)
T ss_pred CHHHHHHHHHHHHHHH
T ss_conf 6589999999999998