HHsearch alignment for GI: 254780264 and conserved domain: PRK13849

>PRK13849 putative crown gall tumor protein VirC1; Provisional.
Probab=97.36  E-value=0.00058  Score=44.16  Aligned_cols=122  Identities=14%  Similarity=0.123  Sum_probs=65.9

Q ss_pred             CCCCHHHHHHHHH---HHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEE------EEE---ECCCCCCCEEEEEEE
Q ss_conf             7889778999999---9808732142201795613780889870853764079------999---607778713899981
Q gi|254780264|r   19 IDAGKTTTTERIL---YYAGKSHKIGEVHDGSATMDWMEQEQERGITITSAST------TVF---WPGRDGGQKKLTIID   86 (701)
Q Consensus        19 vd~GKTTL~d~LL---~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~------sl~---~~~~~~~~~~iNlID   86 (701)
T Consensus        11 GG~GKtT~a~~la~~~~~~g~~v~~iD~Dpq~s~~~W~e~a~~~~~~~~~~~v~~~~~~~~l~~~~e~~~~~~~D~VIID   90 (231)
T PRK13849         11 GGAGKTTALMGLCAALASDGKRVALFEADENRPLTRWKENALRSNTWDPACEVYAADELPLLEAAYEDAELQGFDYALAD   90 (231)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf             98769999999999999789959999689986889999876525898877523405652578999988753699889981


Q ss_pred             CCCCCCCHHHHHHHHHHHCEEEEEEE-----CCCCCCHHHHHHHHH---HHHCCCCEEEEECCCCC
Q ss_conf             79875528999999986045699995-----588888347999999---98739978999817676
Q gi|254780264|r   87 TPGHVDFTMEVERSIRVTDGAIALLD-----SNAGVEPQTETVWRQ---ADKYSVPRVIFCNKMDK  144 (701)
Q Consensus        87 TPGH~DF~~Ev~~aL~~~DgailvVD-----a~eGv~~qT~~vlr~---~~~~~lp~ilvINKiDr  144 (701)
T Consensus        91 tpg~~s--~~~~~Ai~~ADLVLIP~qPSp~D~~~a--~~tv~~i~~~~~~~~~~ip~~vlltRv~a  152 (231)
T PRK13849         91 THGGSS--ELNNTIIASSNLLLIPTMLTPLDIDEA--LSTYRYVIELLLSENLAIPTAILRQRVPV  152 (231)
T ss_pred             CCCCCC--HHHHHHHHHCCEEEECCCCCHHHHHHH--HHHHHHHHHHHHHHCCCCCEEEEEEECCH
T ss_conf             899775--899999997898997799986679999--99999999999972878865666540504