HHsearch alignment for GI: 254780264 and conserved domain: PTZ00132
>PTZ00132 GTP-binding nuclear protein; Provisional.
Probab=98.61 E-value=6e-07 Score=63.35 Aligned_cols=110 Identities=22% Similarity=0.283 Sum_probs=74.9
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEE--EEEEEECCCCCCCEEEEEEECCC
Q ss_conf 7999868788977899999998087321422017956137808898708537640--79999607778713899981798
Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSA--STTVFWPGRDGGQKKLTIIDTPG 89 (701)
Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss--~~sl~~~~~~~~~~~iNlIDTPG 89 (701)
T Consensus 8 KIvllGd~~VGKTsLi~r~~~--~~F~~------~--y~----------pTig~d~~~~~~~~---~~~~i~l~IwDTaG 64 (209)
T PTZ00132 8 KLILVGDGGVGKTTFVKRHLT--GEFEK------K--YI----------ATLGVEVHPLKFYT---NRGKICFNVWDTAG 64 (209)
T ss_pred EEEEECCCCCCHHHHHHHHHH--CCCCC------C--CC----------CCCCEEEEEEEEEE---CCEEEEEEEEECCC
T ss_conf 999999999678999999971--99699------8--77----------76027989999999---99999999998999
Q ss_pred CCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHH-HHHH--HCCCCEEEEECCCCC
Q ss_conf 755289999999860456999955888883479999-9998--739978999817676
Q gi|254780264|r 90 HVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVW-RQAD--KYSVPRVIFCNKMDK 144 (701)
Q Consensus 90 H~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vl-r~~~--~~~lp~ilvINKiDr 144 (701)
T Consensus 65 qe~f~sl~~~yyr~a~~~ilVfDit~~~SF~~l~~W~~ei~~~~~~ipivLVGNK~DL 122 (209)
T PTZ00132 65 QEKFGGLRDGYYIKGQCAIIMFDVTSRITYKNVPNWHRDITRVCENIPIVLVGNKVDV 122 (209)
T ss_pred CCCCCCCCCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf 7445566514424898899984378878999999999999986899878999762322