>TIGR00436 era GTP-binding protein Era; InterPro: IPR005662 Era is an essential G-protein in Escherichia coli identified originally as a homologue protein to Ras (E. coli Ras-like protein). It binds to GTP/GDP and contains a low intrinsic GTPase activity. Its function remains elusive, although it may be associated with cell division, energy metabolism, and cell-cycle check point. The protein has recently been shown to specifically bind to 16S rRNA and the 30S ribosomal subunit . Involvement of Era in protein synthesis is suggested by the fact that Era depletion results in the translation defect both in vitro and in vivo. A Type 2 KH domain is found near the C-terminus. ; GO: 0003723 RNA binding, 0005525 GTP binding, 0005622 intracellular.

Probab=96.28 E-value=0.024 Score=33.83 Aligned_cols=112 Identities=20% Similarity=0.238 Sum_probs=78.2 Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEE-EEEEECCCC Q ss_conf 7999868788977899999998087321422017956137808898708537640799996077787138-999817987 Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKK-LTIIDTPGH 90 (701) Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~-iNlIDTPGH 90 (701) T Consensus 2 ~~~~~g~~~~g~~~~~~~~~~~~~~~~~--~----------~~~------~~~~~~~~~~~~----~~~~~~~~~d~pg~ 59 (278) T TIGR00436 2 FVAILGRPNVGKSTLLNKLLGQKISITS--P----------KPQ------TTRNRISGILTT----GASQNIIFIDTPGF 59 (278) T ss_pred CEEECCCCCCCHHHHHHHHHCCCHHCCC--C----------CCH------HHHHHHHEEEEC----CCCCCEEEEECCCC T ss_conf 1121157765336677766324101002--3----------101------234332001223----66551578625876 Q ss_pred CCC-H--------HHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC Q ss_conf 552-8--------999999986045699995588888347999999987399789998176765 Q gi|254780264|r 91 VDF-T--------MEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKM 145 (701) Q Consensus 91 ~DF-~--------~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~ 145 (701) T Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (278) T TIGR00436 60 HEPEKHKLGELLNKEARSALGGVDLLLFVVDSDEWNGDGDEFLLEKLQNLKRPVLLTLNKLDNK 123 (278) T ss_pred CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHC T ss_conf 5124567788888888753123226889863344556404688987652021010012233310

HHsearch alignment for GI: 254780264 and conserved domain: TIGR00436