HHsearch alignment for GI: 254780264 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=95.36 E-value=0.2 Score=27.82 Aligned_cols=131 Identities=21% Similarity=0.262 Sum_probs=78.0
Q ss_pred HEEEEEEECCCCCCHHHHHHHHHHHCCCCCC----------CCE-ECCCC-----EECCCHH----HHHHHCCCEEEEEE
Q ss_conf 2527999868788977899999998087321----------422-01795-----6137808----89870853764079
Q gi|254780264|r 9 DSRNFGIMAHIDAGKTTTTERILYYAGKSHK----------IGE-VHDGS-----ATMDWME----QEQERGITITSAST 68 (701)
Q Consensus 9 ~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~----------~g~-v~~g~-----~~~D~~~----~E~eRgITi~ss~~ 68 (701)
T Consensus 37 nA~~vG~TG~PGaGKSTl~~~l~~~l--rRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~pt 114 (333)
T TIGR00750 37 NAHVVGITGVPGAGKSTLVEKLIMEL--RRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPT 114 (333)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHH--HHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf 90787664688885777999998999--7659768999887975975514545688775442222332289856767766
Q ss_pred EEEECCCC-----------CCCEEEEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
Q ss_conf 99960777-----------8713899981798755289999999860456999955888883479999999873997899
Q gi|254780264|r 69 TVFWPGRD-----------GGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVI 137 (701)
Q Consensus 69 sl~~~~~~-----------~~~~~iNlIDTPGH~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~il 137 (701)
T Consensus 115 rG~lGGls~at~~~~~lldA~G~DVI~vETVGVG--QSEVdi~-~~aDT~v~v~~pg~GDd~Q~iK----aG~mEiaDI~ 187 (333)
T TIGR00750 115 RGSLGGLSKATRELVKLLDAAGYDVILVETVGVG--QSEVDII-NMADTFVVVTIPGTGDDVQGIK----AGVMEIADIY 187 (333)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC--HHHHHHH-HHHCEEEEEECCCCCCHHHHHH----HHHHEEEEEE
T ss_conf 6752578799999999998638987999841575--2487887-3415058985488783466665----4430232487
Q ss_pred EECCCCCCCCC
Q ss_conf 98176765875
Q gi|254780264|r 138 FCNKMDKMGAD 148 (701)
Q Consensus 138 vINKiDr~~~d 148 (701)
T Consensus 188 VVNKaD~~~a~ 198 (333)
T TIGR00750 188 VVNKADGEGAE 198 (333)
T ss_pred EEECCCCCCHH
T ss_conf 88168876658