HHsearch alignment for GI: 254780264 and conserved domain: cd00882
>cd00882 Ras_like_GTPase Ras-like GTPase superfamily. The Ras-like superfamily of small GTPases consists of several families with an extremely high degree of structural and functional similarity. The Ras superfamily is divided into at least four families in eukaryotes: the Ras, Rho, Rab, and Sar1/Arf families. This superfamily also includes proteins like the GTP translation factors, Era-like GTPases, and G-alpha chain of the heterotrimeric G proteins. Members of the Ras superfamily regulate a wide variety of cellular functions: the Ras family regulates gene expression, the Rho family regulates cytoskeletal reorganization and gene expression, the Rab and Sar1/Arf families regulate vesicle trafficking, and the Ran family regulates nucleocytoplasmic transport and microtubule organization. The GTP translation factor family regulate initiation, elongation, termination, and release in translation, and the Era-like GTPase family regulates cell division, sporulation, and DNA replication. Memb
Probab=99.10 E-value=1.2e-09 Score=80.71 Aligned_cols=110 Identities=25% Similarity=0.246 Sum_probs=75.8
Q ss_pred EECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCC-EEEEEEEEEECCCCCCCEEEEEEECCCCCCC
Q ss_conf 986878897789999999808732142201795613780889870853-7640799996077787138999817987552
Q gi|254780264|r 15 IMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGIT-ITSASTTVFWPGRDGGQKKLTIIDTPGHVDF 93 (701)
Q Consensus 15 iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgIT-i~ss~~sl~~~~~~~~~~~iNlIDTPGH~DF 93 (701)
T Consensus 1 vvG~~~~GKSsl~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~---~~~~~~~~i~D~~g~~~~ 58 (157)
T cd00882 1 VVGDSGVGKTSLLNRLLGGEFV-------------------PEEYETTIIDFYSKTIEV---DGKKVKLQIWDTAGQERF 58 (157)
T ss_pred CCCCCCCCHHHHHHHHHCCCCC-------------------CCCCCCCEEEEEEEEEEE---CCEEEEEEEEECCCCHHH
T ss_conf 9294996889999999719888-------------------764687157899999999---999999999985895115
Q ss_pred HHHHHHHHHHHCEEEEEEECCCCCCHHHH-----HHHHHHHHCCCCEEEEECCCCCCC
Q ss_conf 89999999860456999955888883479-----999999873997899981767658
Q gi|254780264|r 94 TMEVERSIRVTDGAIALLDSNAGVEPQTE-----TVWRQADKYSVPRVIFCNKMDKMG 146 (701)
Q Consensus 94 ~~Ev~~aL~~~DgailvVDa~eGv~~qT~-----~vlr~~~~~~lp~ilvINKiDr~~ 146 (701)
T Consensus 59 ~~~~~~~~~~~~~~i~v~d~~~~~s~~~~~~~~~~~~~~~~~~~~~iiiv~nK~Dl~~ 116 (157)
T cd00882 59 RSLRRLYYRGADGIILVYDVTDRESFENVKEWLLLILINKEGENIPIILVGNKIDLPE 116 (157)
T ss_pred HHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHH
T ss_conf 6789999753579999986588888999999999999975258984999985356154