HHsearch alignment for GI: 254780264 and conserved domain: cd01881

>cd01881 Obg_like The Obg-like subfamily consists of five well-delimited, ancient subfamilies, namely Obg, DRG, YyaF/YchF, Ygr210, and NOG1. Four of these groups (Obg, DRG, YyaF/YchF, and Ygr210) are characterized by a distinct glycine-rich motif immediately following the Walker B motif (G3 box). Obg/CgtA is an essential gene that is involved in the initiation of sporulation and DNA replication in the bacteria Caulobacter and Bacillus, but its exact molecular role is unknown. Furthermore, several OBG family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. Nog1 is a nucleolar protein that might function in ribosome assembly. The DRG and Nog1 subfamilies are ubiquitous in archaea and eukaryotes, the Ygr210 subfamily is present in archaea and fungi, and the Obg and YyaF/YchF subfamilies are ubiquitous in bacteria and eukaryotes. The Obg/Nog1 and DRG subfamilies appear to
Probab=99.27  E-value=1.4e-10  Score=86.68  Aligned_cols=109  Identities=17%  Similarity=0.209  Sum_probs=66.6

Q ss_pred             EECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCC--
Q ss_conf             986878897789999999808732142201795613780889870853764079999607778713899981798755--
Q gi|254780264|r   15 IMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHVD--   92 (701)
Q Consensus        15 iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~D--   92 (701)
T Consensus         1 ivG~PNvGKSTL~N~Lt---~~~~~v~~-~p--------------gTTr~~~~g~~~~~~----~~~i~~~DtpGi~~~~   58 (176)
T cd01881           1 LVGLPNVGKSTLLNALT---NAKPKVAN-YP--------------FTTLEPNLGVVEVPD----GARIQVADIPGLIEGA   58 (176)
T ss_pred             CCCCCCCCHHHHHHHHH---CCCCEEEC-CC--------------CCEEEEEEEEEEECC----CCEEEEEECCCCCCCC
T ss_conf             96999888999999996---89960307-89--------------967612467999479----9669999578754573


Q ss_pred             -----CHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHH-------HHH----------HHCCCCEEEEECCCCCC
Q ss_conf             -----289999999860456999955888883479999-------999----------87399789998176765
Q gi|254780264|r   93 -----FTMEVERSIRVTDGAIALLDSNAGVEPQTETVW-------RQA----------DKYSVPRVIFCNKMDKM  145 (701)
Q Consensus        93 -----F~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vl-------r~~----------~~~~lp~ilvINKiDr~  145 (701)
T Consensus        59 ~~~~~~~~~~l~~~~~~d~il~vvD~~~~~~~~~~~~~~~~~~i~~el~~~~~~~~~~~~~~kp~i~v~NK~Dl~  133 (176)
T cd01881          59 SEGRGLGNQFLAHIRRADAILHVVDASEDDDIGGVDPLEDYEILNAELKLYDLETILGLLTAKPVIYVLNKIDLD  133 (176)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECEECC
T ss_conf             378789999998741088999999898765545445899999999999971156655543269719999686034