HHsearch alignment for GI: 254780264 and conserved domain: cd01885
>cd01885 EF2 EF2 (for archaea and eukarya). Translocation requires hydrolysis of a molecule of GTP and is mediated by EF-G in bacteria and by eEF2 in eukaryotes. The eukaryotic elongation factor eEF2 is a GTPase involved in the translocation of the peptidyl-tRNA from the A site to the P site on the ribosome. The 95-kDa protein is highly conserved, with 60% amino acid sequence identity between the human and yeast proteins. Two major mechanisms are known to regulate protein elongation and both involve eEF2. First, eEF2 can be modulated by reversible phosphorylation. Increased levels of phosphorylated eEF2 reduce elongation rates presumably because phosphorylated eEF2 fails to bind the ribosomes. Treatment of mammalian cells with agents that raise the cytoplasmic Ca2+ and cAMP levels reduce elongation rates by activating the kinase responsible for phosphorylating eEF2. In contrast, treatment of cells with insulin increases elongation rates by promoting eEF2 dephosphorylation. Seco
Probab=100.00 E-value=0 Score=408.03 Aligned_cols=149 Identities=41% Similarity=0.585 Sum_probs=138.1
Q ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECC-----CCCCCEEEEEE
Q ss_conf 2799986878897789999999808732142201795613780889870853764079999607-----77871389998
Q gi|254780264|r 11 RNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPG-----RDGGQKKLTII 85 (701)
Q Consensus 11 RNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~-----~~~~~~~iNlI 85 (701)
T Consensus 1 RNi~iigHvdhGKTTL~D~Ll~~~g~i~~--~~~g~~~~~D~~~~E~eRgiTIks~~isl~~~~~~~~~~~~~~~~inlI 78 (222)
T cd01885 1 RNICIIAHVDHGKTTLSDSLLASAGIISE--KLAGKARYMDSREDEQERGITMKSSAISLYFEYEEEDKADGNEYLINLI 78 (222)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHCCCCCH--HCCCCEEECCCHHHHHHCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEE
T ss_conf 96999866887799999999998598412--1066346514243342054158622689998603443456886389997
Q ss_pred ECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf 1798755289999999860456999955888883479999999873997899981767658755556664111102
Q gi|254780264|r 86 DTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRLG 161 (701)
Q Consensus 86 DTPGH~DF~~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~~~d~~~~l~~i~~~l~ 161 (701)
T Consensus 79 DTPGH~dF~~ev~~al~~~DgailVVDa~eGv~~qT~~vl~~a~~~~l~~il~iNKiDRli~el~l~p~day~~l~ 154 (222)
T cd01885 79 DSPGHVDFSSEVTAALRLCDGALVVVDAVEGVCVQTETVLRQALKERVKPVLVINKIDRLILELKLSPEEAYQRLA 154 (222)
T ss_pred ECCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCHHHHHHHHH
T ss_conf 2885698999999999856817996104578577899999999985999799998903650011799899999999