HHsearch alignment for GI: 254780264 and conserved domain: cd01896
>cd01896 DRG The developmentally regulated GTP-binding protein (DRG) subfamily is an uncharacterized member of the Obg family, an evolutionary branch of GTPase superfamily proteins. GTPases act as molecular switches regulating diverse cellular processes. DRG2 and DRG1 comprise the DRG subfamily in eukaryotes. In view of their widespread expression in various tissues and high conservation among distantly related species in eukaryotes and archaea, DRG proteins may regulate fundamental cellular processes. It is proposed that the DRG subfamily proteins play their physiological roles through RNA binding.
Probab=99.01 E-value=1.4e-08 Score=73.91 Aligned_cols=110 Identities=18% Similarity=0.259 Sum_probs=72.2
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf 79998687889778999999980873214220179561378088987085376407999960777871389998179875
Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV 91 (701)
Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~ 91 (701)
T Consensus 2 ~V~LVG~PN~GKSTLln~LT---~a~~~v~~yp---------------fTT~~pi~g~~~~~-----~~~iqlvDtPGli 58 (233)
T cd01896 2 RVALVGFPSVGKSTLLSKLT---NTKSEVAAYE---------------FTTLTCVPGVLEYK-----GAKIQLLDLPGII 58 (233)
T ss_pred EEEEECCCCCCHHHHHHHHH---CCCCCCCCCC---------------CCCCCCEEEEEEEC-----CEEEEEEECCCCC
T ss_conf 59999999999999999997---8995436989---------------78757477799989-----9899999673002
Q ss_pred CCH-------HHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCC-----CEEEEECCCCCC
Q ss_conf 528-------999999986045699995588888347999999987399-----789998176765
Q gi|254780264|r 92 DFT-------MEVERSIRVTDGAIALLDSNAGVEPQTETVWRQADKYSV-----PRVIFCNKMDKM 145 (701)
Q Consensus 92 DF~-------~Ev~~aL~~~DgailvVDa~eGv~~qT~~vlr~~~~~~l-----p~ilvINKiDr~ 145 (701)
T Consensus 59 ~~a~~g~g~g~~~l~~~r~aD~il~VvD~~~~~~-~~~~i~~eLe~~gi~l~~~~~~v~i~~~~~~ 123 (233)
T cd01896 59 EGAADGKGRGRQVIAVARTADLILMVLDATKPEG-HREILERELEGVGIRLNKRPPNITIKKKKKG 123 (233)
T ss_pred CCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCHH-HHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
T ss_conf 4633332068999999875899999984798266-7899999998605110357876257771358