>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=99.38 E-value=5e-11 Score=89.52 Aligned_cols=111 Identities=15% Similarity=0.240 Sum_probs=69.9 Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC Q ss_conf 79998687889778999999980873214220179561378088987085376407999960777871389998179875 Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV 91 (701) Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~ 91 (701) T Consensus 2 ~VaivG~pNvGKStL~N~L~---g~~~~v~~~-p~--------------TTr~~~~~~~~~~-----~~~~~liDTpGi~ 58 (168) T cd01897 2 TLVIAGYPNVGKSSLVNKLT---RAKPEVAPY-PF--------------TTKSLFVGHFDYK-----YLRWQVIDTPGLL 58 (168) T ss_pred EEEEECCCCCCHHHHHHHHH---CCCCEECCC-CC--------------CCCCCEEEEEEEC-----CCEEEEECCCCCC T ss_conf 79998899988999999995---898602375-87--------------2357436899983-----7276872488655 Q ss_pred CCHHH--------HHHHHH-HHCEEEEEEECCCCCCH---HHHHHHHHHHH--CCCCEEEEECCCCCC Q ss_conf 52899--------999998-60456999955888883---47999999987--399789998176765 Q gi|254780264|r 92 DFTME--------VERSIR-VTDGAIALLDSNAGVEP---QTETVWRQADK--YSVPRVIFCNKMDKM 145 (701) Q Consensus 92 DF~~E--------v~~aL~-~~DgailvVDa~eGv~~---qT~~vlr~~~~--~~lp~ilvINKiDr~ 145 (701) T Consensus 59 ~~~~~~~~~ie~~~~~~l~~~~d~il~viD~~~~~~~~~~~~~~l~~~i~~~~~~~p~i~v~NK~Dl~ 126 (168) T cd01897 59 DRPLEERNTIEMQAITALAHLRAAVLFLFDPSETCGYSLEEQLSLFEEIKPLFKNKPVIVVLNKIDLL 126 (168) T ss_pred CCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCC T ss_conf 67478888999999999983577689999688767848999999999877652588879999475345

HHsearch alignment for GI: 254780264 and conserved domain: cd01897