HHsearch alignment for GI: 254780264 and conserved domain: cd04135
>cd04135 Tc10 TC10 subfamily. TC10 is a Rho family protein that has been shown to induce microspike formation and neurite outgrowth in vitro. Its expression changes dramatically after peripheral nerve injury, suggesting an important role in promoting axonal outgrowth and regeneration. TC10 regulates translocation of insulin-stimulated GLUT4 in adipocytes and has also been shown to bind directly to Golgi COPI coat proteins. GTP-bound TC10 in vitro can bind numerous potential effectors. Depending on its subcellular localization and distinct functional domains, TC10 can differentially regulate two types of filamentous actin in adipocytes. TC10 mRNAs are highly expressed in three types of mouse muscle tissues: leg skeletal muscle, cardiac muscle, and uterus; they were also present in brain, with higher levels in adults than in newborns. TC10 has also been shown to play a role in regulating the expression of cystic fibrosis transmembrane conductance regulator (CFTR) through interacti
Probab=98.52 E-value=3e-06 Score=58.82 Aligned_cols=111 Identities=17% Similarity=0.130 Sum_probs=73.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC
Q ss_conf 79998687889778999999980873214220179561378088987085376407999960777871389998179875
Q gi|254780264|r 12 NFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHV 91 (701)
Q Consensus 12 Nv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~ 91 (701)
T Consensus 2 Kiv~vGd~~VGKTsli~rf~~--~~f~~--------~y~pTi~~---------~~~~~i~v---~~~~~~l~i~DTaG~e 59 (174)
T cd04135 2 KCVVVGDGAVGKTCLLMSYAN--DAFPE--------EYVPTVFD---------HYAVSVTV---GGKQYLLGLYDTAGQE 59 (174)
T ss_pred EEEEECCCCCCHHHHHHHHHH--CCCCC--------CCCCEEEE---------EEEEEEEE---CCEEEEEEEEECCCCC
T ss_conf 899999899859999999962--98998--------86885752---------02279999---9999999999797640
Q ss_pred CCHHHHHHHHHHHCEEEEEEECCCCCCHHH-HHHHHH-HH--HCCCCEEEEECCCCC
Q ss_conf 528999999986045699995588888347-999999-98--739978999817676
Q gi|254780264|r 92 DFTMEVERSIRVTDGAIALLDSNAGVEPQT-ETVWRQ-AD--KYSVPRVIFCNKMDK 144 (701)
Q Consensus 92 DF~~Ev~~aL~~~DgailvVDa~eGv~~qT-~~vlr~-~~--~~~lp~ilvINKiDr 144 (701)
T Consensus 60 ~~~~~~~~~~~~a~~~ilvydi~~~~Sf~~~~~~w~~~~~~~~~~~piilvgnK~DL 116 (174)
T cd04135 60 DYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPYLLVGTQIDL 116 (174)
T ss_pred CCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHH
T ss_conf 315565998557876789843797788999999999999986849988999685230