HHsearch alignment for GI: 254780264 and conserved domain: pfam00071
>pfam00071 Ras Ras family. Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See pfam00009 pfam00025, pfam00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices.
Probab=98.98 E-value=5.1e-09 Score=76.63 Aligned_cols=111 Identities=21% Similarity=0.175 Sum_probs=74.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCC
Q ss_conf 99986878897789999999808732142201795613780889870853764079999607778713899981798755
Q gi|254780264|r 13 FGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDTPGHVD 92 (701)
Q Consensus 13 v~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~D 92 (701)
T Consensus 2 i~vvG~~~vGKTsli~r~~~--~~f~~--------~~~--------~t~~~~~~~~~~~~~---~~~~~~~i~Dt~G~e~ 60 (162)
T pfam00071 2 LVLVGDGGVGKSSLLIRFTQ--NKFPE--------EYI--------PTIGVDFYTKTIEVD---GKTVKLQIWDTAGQER 60 (162)
T ss_pred EEEECCCCCCHHHHHHHHHH--CCCCC--------CCC--------CCCEEEEEEEEEEEC---CEEEEEEEEECCCCHH
T ss_conf 89999799779999999961--99998--------747--------741355678999999---9999999997898720
Q ss_pred CHHHHHHHHHHHCEEEEEEECCCCCCHH-HHHHHHHHH---HCCCCEEEEECCCCC
Q ss_conf 2899999998604569999558888834-799999998---739978999817676
Q gi|254780264|r 93 FTMEVERSIRVTDGAIALLDSNAGVEPQ-TETVWRQAD---KYSVPRVIFCNKMDK 144 (701)
Q Consensus 93 F~~Ev~~aL~~~DgailvVDa~eGv~~q-T~~vlr~~~---~~~lp~ilvINKiDr 144 (701)
T Consensus 61 ~~~~~~~~~~~ad~~iivfd~~~~~S~~~i~~~~~~i~~~~~~~~piilvgnK~Dl 116 (162)
T pfam00071 61 FRALRPLYYRGAQGFLLVYDITSRDSFENVKKWLEEILRHADDNVPIVLVGNKCDL 116 (162)
T ss_pred HHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCH
T ss_conf 46788998625765504234898899999999999999857988628899752474