HHsearch alignment for GI: 254780264 and conserved domain: pfam02492

>pfam02492 cobW CobW/HypB/UreG, nucleotide-binding domain. This domain is found in HypB, a hydrogenase expression / formation protein, and UreG a urease accessory protein. Both these proteins contain a P-loop nucleotide binding motif. HypB has GTPase activity and is a guanine nucleotide binding protein. It is not known whether UreG binds GTP or some other nucleotide. Both enzymes are involved in nickel binding. HypB can store nickel and is required for nickel dependent hydrogenase expression. UreG is required for functional incorporation of the urease nickel metallocenter. GTP hydrolysis may required by these proteins for nickel incorporation into other nickel proteins. This family of domains also contains P47K, a Pseudomonas chlororaphis protein needed for nitrile hydratase expression, and the cobW gene product, which may be involved in cobalamin biosynthesis in Pseudomonas denitrificans.
Probab=95.92  E-value=0.13  Score=29.15  Aligned_cols=128  Identities=22%  Similarity=0.212  Sum_probs=61.9

Q ss_pred             EEECCCCCCHHHHHHHHHHHCCCCCCCC--EECCCCEECCCHHHHHHHCCCEEE-EEEEEEEC-------------CCCC
Q ss_conf             9986878897789999999808732142--201795613780889870853764-07999960-------------7778
Q gi|254780264|r   14 GIMAHIDAGKTTTTERILYYAGKSHKIG--EVHDGSATMDWMEQEQERGITITS-ASTTVFWP-------------GRDG   77 (701)
Q Consensus        14 ~iiaHvd~GKTTL~d~LL~~~g~i~~~g--~v~~g~~~~D~~~~E~eRgITi~s-s~~sl~~~-------------~~~~   77 (701)
T Consensus         4 iitGFLGsGKTTll~~ll~~~~~~~~~avI~Ne~g~~~iD~~ll-~~~~~~v~el~~GciCc~~~~d~~~~l~~l~~~~~   82 (174)
T pfam02492         4 VLTGFLGSGKTTLLEHLLRDNREGLKIAVIVNDFGETGIDAELL-RETGAEIVELNNGCICCTIREDLSMVLEALLELKL   82 (174)
T ss_pred             EEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHH-HHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             99348878899999999984448984799993365302079998-70696189974886645433369999999985578


Q ss_pred             CCEEEEEEECCCCCCCHH--HHHHHHHHHCEEEEEEECC---CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCC
Q ss_conf             713899981798755289--9999998604569999558---888834799999998739978999817676587
Q gi|254780264|r   78 GQKKLTIIDTPGHVDFTM--EVERSIRVTDGAIALLDSN---AGVEPQTETVWRQADKYSVPRVIFCNKMDKMGA  147 (701)
Q Consensus        78 ~~~~iNlIDTPGH~DF~~--Ev~~aL~~~DgailvVDa~---eGv~~qT~~vlr~~~~~~lp~ilvINKiDr~~~  147 (701)
T Consensus        83 ~~~d~iiIE~sGla~p~~i~~~~~~-~~~~~~i~vvDa~~~~~~~~~~-~~~~~Qi---~~AD~vvlNK~Dl~~~  152 (174)
T pfam02492        83 PRLDLLFIETTGLACPAPVLDLRSD-LGLDGVVTVVDVKNFTEGEDIP-EKAPDQI---AFADLIVINKTDLAPA  152 (174)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHC-CCCCEEEEEEECHHHHHCCCCH-HHHHHHH---HHCCEEEEEHHHCCCC
T ss_conf             9999999958766770777765320-2654599999723433002007-8999999---8769999846653782