HHsearch alignment for GI: 254780264 and conserved domain: smart00053
>smart00053 DYNc Dynamin, GTPase. Large GTPases that mediate vesicle trafficking. Dynamin participates in the endocytic uptake of receptors, associated ligands, and plasma membrane following an exocytic event.
Probab=96.39 E-value=0.074 Score=30.64 Aligned_cols=132 Identities=20% Similarity=0.206 Sum_probs=62.8
Q ss_pred EEEEEECCCCCCHHHHHHHHHH------HCCC-CCCCCEE--------------CCCCEECCCHHHH------HHH--C-
Q ss_conf 2799986878897789999999------8087-3214220--------------1795613780889------870--8-
Q gi|254780264|r 11 RNFGIMAHIDAGKTTTTERILY------YAGK-SHKIGEV--------------HDGSATMDWMEQE------QER--G- 60 (701)
Q Consensus 11 RNv~iiaHvd~GKTTL~d~LL~------~~g~-i~~~g~v--------------~~g~~~~D~~~~E------~eR--g- 60 (701)
T Consensus 27 PqiVVvGdQSsGKSSvLEaitGi~FlPr~~g~cTR~p~~i~l~~~~~~~~~~~~~~~~~~~~~~~v~~~i~~~~~~~~g~ 106 (240)
T smart00053 27 PQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLINSSTEYAEFLHCKGKKFTDFDEVRNEIEAETDRVTGT 106 (240)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEECCEEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 84899888787589999998788755568972764406999733886512477437863489899999999988753267
Q ss_pred -CCEEEEEEEEEECCCCCCCEEEEEEECCCCC--------CCHHHHHHH-----HHHHCEEEE-EEECCCCCCHHHHHHH
Q ss_conf -5376407999960777871389998179875--------528999999-----986045699-9955888883479999
Q gi|254780264|r 61 -ITITSASTTVFWPGRDGGQKKLTIIDTPGHV--------DFTMEVERS-----IRVTDGAIA-LLDSNAGVEPQTETVW 125 (701)
Q Consensus 61 -ITi~ss~~sl~~~~~~~~~~~iNlIDTPGH~--------DF~~Ev~~a-----L~~~Dgail-vVDa~eGv~~qT~~vl 125 (701)
T Consensus 107 ~~~~s~~~l~lei~gP--~~p~LTlvDLPGl~~~~~~~q~~~~~~~v~~lv~~Yi~~p~tIILaVv~a~--~D~anq~~l 182 (240)
T smart00053 107 NKGISPVPINLRVYSP--HVLNLTLIDLPGITKVAVGDQPPDIEEQIKDMIKQFISKEECLILAVTPAN--VDLANSDAL 182 (240)
T ss_pred CCCCCCCCEEEEEECC--CCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCC--CCHHHHHHH
T ss_conf 8876788559999479--998854414754124678998567999999999998479880699984078--567661999
Q ss_pred HHHH---HCCCCEEEEECCCCCCC
Q ss_conf 9998---73997899981767658
Q gi|254780264|r 126 RQAD---KYSVPRVIFCNKMDKMG 146 (701)
Q Consensus 126 r~~~---~~~lp~ilvINKiDr~~ 146 (701)
T Consensus 183 ~lAr~~Dp~g~RTiGVlTKpDl~~ 206 (240)
T smart00053 183 KLAKEVDPQGERTIGVITKLDLMD 206 (240)
T ss_pred HHHHHHCCCCCEEEEEECCCCCCC
T ss_conf 999971999982899973533457