HHsearch alignment for GI: 254780264 and conserved domain: smart00178
>smart00178 SAR Sar1p-like members of the Ras-family of small GTPases. Yeast SAR1 is an essential gene required for transport of secretory proteins from the endoplasmic reticulum to the Golgi apparatus.
Probab=98.47 E-value=3.3e-06 Score=58.60 Aligned_cols=114 Identities=19% Similarity=0.157 Sum_probs=78.7
Q ss_pred HHEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEECCCCEECCCHHHHHHHCCCEEEEEEEEEECCCCCCCEEEEEEEC
Q ss_conf 02527999868788977899999998087321422017956137808898708537640799996077787138999817
Q gi|254780264|r 8 EDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERGITITSASTTVFWPGRDGGQKKLTIIDT 87 (701)
Q Consensus 8 e~iRNv~iiaHvd~GKTTL~d~LL~~~g~i~~~g~v~~g~~~~D~~~~E~eRgITi~ss~~sl~~~~~~~~~~~iNlIDT 87 (701)
T Consensus 15 ~ke~~ililGLd~aGKTTil~~lk~--~~~------~------~~~-------PT~g~~~e~~~~~-----~~~~~~wDl 68 (184)
T smart00178 15 NKHAKILFLGLDNAGKTTLLHMLKN--DRL------A------QHQ-------PTQHPTSEELAIG-----NIKFTTFDL 68 (184)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHC--CCC------C------CCC-------CCCCCCEEEEEEC-----CEEEEEEEC
T ss_conf 6614799996588988999999806--997------5------305-------7878864899999-----999999988
Q ss_pred CCCCCCHHHHHHHHHHHCEEEEEEECCCCC-CHHHHHHHH----HHHHCCCCEEEEECCCCCCCC
Q ss_conf 987552899999998604569999558888-834799999----998739978999817676587
Q gi|254780264|r 88 PGHVDFTMEVERSIRVTDGAIALLDSNAGV-EPQTETVWR----QADKYSVPRVIFCNKMDKMGA 147 (701)
Q Consensus 88 PGH~DF~~Ev~~aL~~~DgailvVDa~eGv-~~qT~~vlr----~~~~~~lp~ilvINKiDr~~~ 147 (701)
T Consensus 69 gG~~~~R~lW~~Yy~~~~~iIfVVDssD~~r~~eak~~L~~ll~~~~l~~~PlLilaNKqDl~~a 133 (184)
T smart00178 69 GGHQQARRLWKDYFPEVNGIVYLVDAYDKERFAESKRELDALLSDEELATVPFLILGNKIDAPYA 133 (184)
T ss_pred CCCHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 98777889999882167589999726868899999999999864676559709999975677789