RPSBLAST alignment for GI: 254780264 and conserved domain: TIGR00484
>gnl|CDD|129575 TIGR00484, EF-G, translation elongation factor EF-G. After peptide bond formation, this elongation factor of bacteria and organelles catalyzes the translocation of the tRNA-mRNA complex, with its attached nascent polypeptide chain, from the A-site to the P-site of the ribosome. Every completed bacterial genome has at least one copy, but some species have additional EF-G-like proteins. The closest homolog to canonical (e.g. E. coli) EF-G in the spirochetes clusters as if it is derived from mitochondrial forms, while a more distant second copy is also present. Synechocystis PCC6803 has a few proteins more closely related to EF-G than to any other characterized protein. Two of these resemble E. coli EF-G more closely than does the best match from the spirochetes; it may be that both function as authentic EF-G. Length = 689
Score = 1009 bits (2610), Expect = 0.0
Identities = 411/694 (59%), Positives = 510/694 (73%), Gaps = 7/694 (1%)
Query: 1 MARKCKIEDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERG 60
MAR + RN GI AHIDAGKTTTTERIL+Y G+ HKIGEVHDG+ATMDWMEQE+ERG
Sbjct: 1 MARTTDLNRFRNIGISAHIDAGKTTTTERILFYTGRIHKIGEVHDGAATMDWMEQEKERG 60
Query: 61 ITITSASTTVFWPGRDGGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQ 120
ITITSA+TTVFW G ++ IIDTPGHVDFT+EVERS+RV DGA+A+LD+ GV+PQ
Sbjct: 61 ITITSAATTVFWKGH-----RINIIDTPGHVDFTVEVERSLRVLDGAVAVLDAVGGVQPQ 115
Query: 121 TETVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRLGANPLVIQLPVGSESNFQGV 180
+ETVWRQA++Y VPR+ F NKMDK GA+F R V I RLGAN + IQLP+G+E NF GV
Sbjct: 116 SETVWRQANRYEVPRIAFVNKMDKTGANFLRVVNQIKQRLGANAVPIQLPIGAEDNFIGV 175
Query: 181 IDLVEMKALLWKNEDLGSSWDVVEIPEDMKDSANSYRDKMIESIVELDDSAMDSYLQGES 240
IDLVEMKA + N D G+ EIP D+ + A R+ ++E++ E D+ M+ YL+GE
Sbjct: 176 IDLVEMKAYFF-NGDKGTKAIEKEIPSDLLEQAKELRENLVEAVAEFDEELMEKYLEGEE 234
Query: 241 FSSDRIRSLIRLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSPLDVRAIKGVDVKS 300
+ + I++ IR G ++ +FFPVLCGS+FKNKGVQ LLDAVVDYLPSP DV AIKG+D +
Sbjct: 235 LTIEEIKNAIRKGVLNCEFFPVLCGSAFKNKGVQLLLDAVVDYLPSPTDVPAIKGIDPDT 294
Query: 301 NSEIDVSAVDSSPLSMLAFKVMADSFVGSLTFCRIYSGKISKGDSLLNTVKGKKERVGRM 360
EI+ A D P S LAFKV D FVG LTF R+YSG + G + N+ K KKERVGR+
Sbjct: 295 EKEIERKASDDEPFSALAFKVATDPFVGQLTFVRVYSGVLKSGSYVKNSRKNKKERVGRL 354
Query: 361 LQMHSNSREDIDEAYCGDIIALAGLKETTTGDTLCDPSRPIVLERMDFPEPVIQIAIEPK 420
++MH+N+RE+I E GDI A GLK+TTTGDTLCDP ++LERM+FPEPVI +A+EPK
Sbjct: 355 VKMHANNREEIKEVRAGDICAAIGLKDTTTGDTLCDPKIDVILERMEFPEPVISLAVEPK 414
Query: 421 SKGDQERMSLALSRLVAEDPSLRVSMDPNSGQTNLSGMGELHLEIIVDRMLREFKVDANV 480
+K DQE+M +AL +L EDP+ R DP +GQT ++GMGELHL+IIVDRM REFKV+ANV
Sbjct: 415 TKADQEKMGIALGKLAEEDPTFRTFTDPETGQTIIAGMGELHLDIIVDRMKREFKVEANV 474
Query: 481 GAPYVSYRESVTKSCVHDYIHKKQSGGAGQFAKVKIAFEPNPDGDDFVFESKIVGGAIPK 540
GAP V+YRE++ + H KQSGG GQ+ VKI FEP + F ++I GG IP+
Sbjct: 475 GAPQVAYRETIRSKVEVEGKHAKQSGGRGQYGHVKIRFEPLEPK-GYEFVNEIKGGVIPR 533
Query: 541 EYIPGVRKGIESMLSSGPLAGFPMLGMKVTLLDGDYHDVDSSVLAFEIAARACFREAASK 600
EYIP V KG++ + SGPLAG+P++ +K TL DG YHDVDSS +AF++AA F+EA K
Sbjct: 534 EYIPAVDKGLQEAMESGPLAGYPVVDIKATLFDGSYHDVDSSEMAFKLAASLAFKEAGKK 593
Query: 601 MGVQLLEPLMKVEVTVPAEYVGDVIGDLSSRRGQIQGQENRSVYVVIDAHVPLSCMFKYV 660
LLEP+MKVEV VP EY+GDV+GDLSSRRG I+G E R I A VPLS MF Y
Sbjct: 594 ANPVLLEPIMKVEVEVPEEYMGDVMGDLSSRRGIIEGMEARGNVQKIKAEVPLSEMFGYA 653
Query: 661 DSLRSMSQGRGQYTMIFDHYAPVPAHVSKEIQEK 694
LRS +QGRG Y+M F HY VP+ V+ EI EK
Sbjct: 654 TDLRSFTQGRGTYSMEFLHYGEVPSSVANEIIEK 687