RPSBLAST alignment for GI: 254780264 and conserved domain: TIGR00484

>gnl|CDD|129575 TIGR00484, EF-G, translation elongation factor EF-G. After peptide bond formation, this elongation factor of bacteria and organelles catalyzes the translocation of the tRNA-mRNA complex, with its attached nascent polypeptide chain, from the A-site to the P-site of the ribosome. Every completed bacterial genome has at least one copy, but some species have additional EF-G-like proteins. The closest homolog to canonical (e.g. E. coli) EF-G in the spirochetes clusters as if it is derived from mitochondrial forms, while a more distant second copy is also present. Synechocystis PCC6803 has a few proteins more closely related to EF-G than to any other characterized protein. Two of these resemble E. coli EF-G more closely than does the best match from the spirochetes; it may be that both function as authentic EF-G. Length = 689
 Score = 1009 bits (2610), Expect = 0.0
 Identities = 411/694 (59%), Positives = 510/694 (73%), Gaps = 7/694 (1%)

Query: 1   MARKCKIEDSRNFGIMAHIDAGKTTTTERILYYAGKSHKIGEVHDGSATMDWMEQEQERG 60
           MAR   +   RN GI AHIDAGKTTTTERIL+Y G+ HKIGEVHDG+ATMDWMEQE+ERG
Sbjct: 1   MARTTDLNRFRNIGISAHIDAGKTTTTERILFYTGRIHKIGEVHDGAATMDWMEQEKERG 60

Query: 61  ITITSASTTVFWPGRDGGQKKLTIIDTPGHVDFTMEVERSIRVTDGAIALLDSNAGVEPQ 120
           ITITSA+TTVFW G      ++ IIDTPGHVDFT+EVERS+RV DGA+A+LD+  GV+PQ
Sbjct: 61  ITITSAATTVFWKGH-----RINIIDTPGHVDFTVEVERSLRVLDGAVAVLDAVGGVQPQ 115

Query: 121 TETVWRQADKYSVPRVIFCNKMDKMGADFYRSVEMISSRLGANPLVIQLPVGSESNFQGV 180
           +ETVWRQA++Y VPR+ F NKMDK GA+F R V  I  RLGAN + IQLP+G+E NF GV
Sbjct: 116 SETVWRQANRYEVPRIAFVNKMDKTGANFLRVVNQIKQRLGANAVPIQLPIGAEDNFIGV 175

Query: 181 IDLVEMKALLWKNEDLGSSWDVVEIPEDMKDSANSYRDKMIESIVELDDSAMDSYLQGES 240
           IDLVEMKA  + N D G+     EIP D+ + A   R+ ++E++ E D+  M+ YL+GE 
Sbjct: 176 IDLVEMKAYFF-NGDKGTKAIEKEIPSDLLEQAKELRENLVEAVAEFDEELMEKYLEGEE 234

Query: 241 FSSDRIRSLIRLGTISVKFFPVLCGSSFKNKGVQPLLDAVVDYLPSPLDVRAIKGVDVKS 300
            + + I++ IR G ++ +FFPVLCGS+FKNKGVQ LLDAVVDYLPSP DV AIKG+D  +
Sbjct: 235 LTIEEIKNAIRKGVLNCEFFPVLCGSAFKNKGVQLLLDAVVDYLPSPTDVPAIKGIDPDT 294

Query: 301 NSEIDVSAVDSSPLSMLAFKVMADSFVGSLTFCRIYSGKISKGDSLLNTVKGKKERVGRM 360
             EI+  A D  P S LAFKV  D FVG LTF R+YSG +  G  + N+ K KKERVGR+
Sbjct: 295 EKEIERKASDDEPFSALAFKVATDPFVGQLTFVRVYSGVLKSGSYVKNSRKNKKERVGRL 354

Query: 361 LQMHSNSREDIDEAYCGDIIALAGLKETTTGDTLCDPSRPIVLERMDFPEPVIQIAIEPK 420
           ++MH+N+RE+I E   GDI A  GLK+TTTGDTLCDP   ++LERM+FPEPVI +A+EPK
Sbjct: 355 VKMHANNREEIKEVRAGDICAAIGLKDTTTGDTLCDPKIDVILERMEFPEPVISLAVEPK 414

Query: 421 SKGDQERMSLALSRLVAEDPSLRVSMDPNSGQTNLSGMGELHLEIIVDRMLREFKVDANV 480
           +K DQE+M +AL +L  EDP+ R   DP +GQT ++GMGELHL+IIVDRM REFKV+ANV
Sbjct: 415 TKADQEKMGIALGKLAEEDPTFRTFTDPETGQTIIAGMGELHLDIIVDRMKREFKVEANV 474

Query: 481 GAPYVSYRESVTKSCVHDYIHKKQSGGAGQFAKVKIAFEPNPDGDDFVFESKIVGGAIPK 540
           GAP V+YRE++      +  H KQSGG GQ+  VKI FEP      + F ++I GG IP+
Sbjct: 475 GAPQVAYRETIRSKVEVEGKHAKQSGGRGQYGHVKIRFEPLEPK-GYEFVNEIKGGVIPR 533

Query: 541 EYIPGVRKGIESMLSSGPLAGFPMLGMKVTLLDGDYHDVDSSVLAFEIAARACFREAASK 600
           EYIP V KG++  + SGPLAG+P++ +K TL DG YHDVDSS +AF++AA   F+EA  K
Sbjct: 534 EYIPAVDKGLQEAMESGPLAGYPVVDIKATLFDGSYHDVDSSEMAFKLAASLAFKEAGKK 593

Query: 601 MGVQLLEPLMKVEVTVPAEYVGDVIGDLSSRRGQIQGQENRSVYVVIDAHVPLSCMFKYV 660
               LLEP+MKVEV VP EY+GDV+GDLSSRRG I+G E R     I A VPLS MF Y 
Sbjct: 594 ANPVLLEPIMKVEVEVPEEYMGDVMGDLSSRRGIIEGMEARGNVQKIKAEVPLSEMFGYA 653

Query: 661 DSLRSMSQGRGQYTMIFDHYAPVPAHVSKEIQEK 694
             LRS +QGRG Y+M F HY  VP+ V+ EI EK
Sbjct: 654 TDLRSFTQGRGTYSMEFLHYGEVPSSVANEIIEK 687