HHsearch alignment for GI: 254780265 and conserved domain: CHL00053

Probab=100.00  E-value=0  Score=394.36  Aligned_cols=155  Identities=50%  Similarity=0.789  Sum_probs=154.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEE
Q ss_conf             98989997555799974378799999999976695999999999999866742488638999999984275404778752
Q gi|254780265|r    1 MSRRRRAVVREVLPDPKFSDFVVAKFMNAIMYGGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRV   80 (156)
Q Consensus         1 m~Rr~~~~kr~~~pD~~y~~~lv~kliN~lMk~GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~   80 (156)
T Consensus         1 m~rr~~~~kr~~~~d~~y~~~lv~kfin~lM~~GKK~~A~~Iv~~al~~I~~~t~~~Pi~vl~~Ai~N~~P~vevks~rv   80 (155)
T CHL00053          1 MSRRGTAKKRTAKSDPIYRNRLVNMLVNRILKHGKKSLAYRIVYRALKKIQQKTETNPLSVLRQAIRNVTPDVEVKARRV   80 (155)
T ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf             98999998787999977587999999999984450999999999999999988079878999999997598504676521


Q ss_pred             CCCCEECEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHCCC
Q ss_conf             463000001048579999999999999985799998999999999997388872630788999999988853256
Q gi|254780265|r   81 GGAAYSVPGEITSKRSQALAIRWLIMAARKRNETTMIDRLGGEIIDAANNRGVAVRKREETHKVAEANRAFSHYR  155 (156)
Q Consensus        81 gG~~yqvP~~i~~~r~~~lAirWii~~a~~r~~~~~~~~La~Eii~A~~~~g~aikkK~elhk~A~aNRa~ah~R  155 (156)
T Consensus        81 GG~~yqVPv~v~~~Rr~~lAirWii~aar~r~~k~~~~~La~Eii~A~~~~g~avkKk~e~hk~AeaNRafah~R  155 (155)
T CHL00053         81 GGSTYQVPIEIGSTRGKALAIRWLLKASRKRSGRNMAFKLSSELVDAAKGSGNAIRKKEETHRMAEANRAFAHFR  155 (155)
T ss_pred             CCEEEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             873688500007879999999999999986589988999999999999677833347889999999866141479