HHsearch results for GI: 254780265 and protein with PDBid: 1iqv_A
>1iqv_A Ribosomal protein S7; RNA-binding, decoding center, helix-turn- helix, ribosome; 2.10A {Pyrococcus horikoshii} SCOP: a.75.1.1
Probab=100.00 E-value=4.2e-45 Score=290.80 Aligned_cols=131 Identities=30% Similarity=0.471 Sum_probs=126.1
Q ss_pred CCHHHHHHHHHHHHC--------------------CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 787999999999766--------------------959999999999998667424886389999999842754047787
Q gi|254780265|r 19 SDFVVAKFMNAIMYG--------------------GKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTR 78 (156)
Q Consensus 19 ~~~lv~kliN~lMk~--------------------GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~ 78 (156)
+.++|++|||.||++ |||++|++||++||++|+.+|++||++||++||+|++|.+||+++
T Consensus 63 ~~~IVERliN~lM~~G~n~~~~~~~~~~~~~~~~~GKK~~A~kIv~~A~~iI~~kT~~nPi~Vl~~AI~N~~P~~ev~si 142 (218)
T 1iqv_A 63 NVHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSV 142 (218)
T ss_dssp -CBHHHHHHHHHHTTCCC-----------------CHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHSCSCEEEEE
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf 58699999988642455422223310000014577729999999999999999855998799999999967983003777
Q ss_pred EECCCCEECEEECCHHHHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHHHCC--CCCCEECHHHHHHHHHHHH
Q ss_conf 52463000001048579999999999999985---79999899999999999738--8872630788999999988
Q gi|254780265|r 79 RVGGAAYSVPGEITSKRSQALAIRWLIMAARK---RNETTMIDRLGGEIIDAANN--RGVAVRKREETHKVAEANR 149 (156)
Q Consensus 79 r~gG~~yqvP~~i~~~r~~~lAirWii~~a~~---r~~~~~~~~La~Eii~A~~~--~g~aikkK~elhk~A~aNR 149 (156)
++||++||||++++|.||+++|||||+++|++ |++++|+++||+||++|++| +|.||+||+|+||+|+|||
T Consensus 143 r~GG~~yqvPV~vsp~Rr~~lAirwI~~~ar~~~~r~~ks~~e~LA~EIi~Aa~~~~ks~AikKKeE~hK~AeaNR 218 (218)
T 1iqv_A 143 MFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIERIAESSR 218 (218)
T ss_dssp EETTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHCC
T ss_pred ECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCC
T ss_conf 4398888617221688999999999999999864678888999999999999758788655650788999898568