HHsearch results for GI: 254780265 and protein with PDBid: 2zkq_g
>2zkq_g 40S ribosomal protein S5E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 3jyv_G*
Probab=100.00 E-value=1.4e-45 Score=293.42 Aligned_cols=135 Identities=29% Similarity=0.409 Sum_probs=129.7
Q ss_pred CCCCCCHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEECEEE
Q ss_conf 974378799999999976----6959999999999998667424886389999999842754047787524630000010
Q gi|254780265|r 15 DPKFSDFVVAKFMNAIMY----GGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRVGGAAYSVPGE 90 (156)
Q Consensus 15 D~~y~~~lv~kliN~lMk----~GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~gG~~yqvP~~ 90 (156)
..+.+.++|++|||.||. +|||++|++||++||++|+++|++||++||++||+|++|.+|++++++||.+||||++
T Consensus 61 f~K~~~~iverliN~LM~~g~k~GKK~~A~kIv~~Af~iI~~~T~~nPi~Vl~~AI~N~~P~~ev~rir~GG~~y~vPV~ 140 (204)
T 2zkq_g 61 FRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVD 140 (204)
T ss_dssp --CCCHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHSCSCEEEEEEETTEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEE
T ss_conf 26556859999999999977607488999999999999999736898899999999827996478997418746872023
Q ss_pred CCHHHHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHHHCCCCC--CEECHHHHHHHHHHHH
Q ss_conf 48579999999999999985---79999899999999999738887--2630788999999988
Q gi|254780265|r 91 ITSKRSQALAIRWLIMAARK---RNETTMIDRLGGEIIDAANNRGV--AVRKREETHKVAEANR 149 (156)
Q Consensus 91 i~~~r~~~lAirWii~~a~~---r~~~~~~~~La~Eii~A~~~~g~--aikkK~elhk~A~aNR 149 (156)
++|.||+++|||||+++|++ |++++|+++||+||++|++|+|. ||+||+|+||+|+|||
T Consensus 141 vsp~Rr~~lAlrwi~~~ar~~~~r~~ks~~e~LA~Eii~Aa~~~g~s~AikKKeEihr~A~aNR 204 (204)
T 2zkq_g 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204 (204)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHC-CTTCCC-CHHHHHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCC
T ss_conf 1788999999999999998642578887999999999999818899631213889999998568