HHSEARCH alignment of GI: 254780265 and SCOP domain: d1husa_

Alignment
>d1husa_ a.75.1.1 (A:) Ribosomal protein S7 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00  E-value=0  Score=334.18  Aligned_cols=139  Identities=55%  Similarity=0.890  Sum_probs=137.6

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCEECEE
Q ss_conf             55799974378799999999976695999999999999866742488638999999984275404778752463000001
Q gi|254780265|r   10 REVLPDPKFSDFVVAKFMNAIMYGGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRVGGAAYSVPG   89 (156)
Q Consensus        10 r~~~pD~~y~~~lv~kliN~lMk~GKK~~A~kIv~~al~~I~~~~~~npi~il~~Ai~n~~P~~evk~~r~gG~~yqvP~   89 (156)
                      |.++|||+|+|++|++|||+||++|||++|++|++++|++|+++|++||+++|++||+|++|.+||+++++||++||||+
T Consensus         1 r~i~pd~~y~~~lv~k~iN~lM~~GKK~~A~kiv~~al~~i~~~~~~~pi~vl~~Ai~n~~P~~ev~~~r~GG~~yqvPv   80 (139)
T d1husa_           1 RDVLPDPIYNSKLVTRLINKIMIDGKKSKAQKILYTAFDIIRERTGKDPMEVFEQALKNVMPVLEVRARRVGGANYQVPV   80 (139)
T ss_dssp             CCCCCCTTTCCHHHHHHHHHHCCTTCHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHCCSEEEECCEETTEECCEEE
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCEEEEE
T ss_conf             99899876698899999999988107999999999989999985689860499999986320340232541763247657


Q ss_pred             ECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEECHHHHHHHHHHH
Q ss_conf             04857999999999999998579999899999999999738887263078899999998
Q gi|254780265|r   90 EITSKRSQALAIRWLIMAARKRNETTMIDRLGGEIIDAANNRGVAVRKREETHKVAEAN  148 (156)
Q Consensus        90 ~i~~~r~~~lAirWii~~a~~r~~~~~~~~La~Eii~A~~~~g~aikkK~elhk~A~aN  148 (156)
                      ++++.||++||||||+++|++|++++|+++||+||++|++|+|.|++||+|+||+|+||
T Consensus        81 ~i~~~rr~~lAirwi~~~a~~r~~~~~~~~La~Eii~A~~~~g~avkKK~e~hk~AeaN  139 (139)
T d1husa_          81 EVRPDRRVSLGLRWLVQYARLRNEKTMEERLANEIMDAANNTGAAVKKREDTHKMAEAN  139 (139)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHHSCSSSHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHHC
T ss_pred             EECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCC
T ss_conf             60869999999999999998769887899999999999848884655278888887548


SCOP domain information

class: All alpha proteins
fold: Ribosomal protein S7
superfamily: Ribosomal protein S7
family: Ribosomal protein S7
domain: Ribosomal protein S7
species: Bacillus stearothermophilus [TaxId: 1422]