PSIBLAST alignment of GI: 254780265 and protein with PDB id: 2zkq
gi|187609260|pdb|2ZKQ|GG Chain g, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 204
Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 5 RRAVVREVLPDPKFSDFVVAKFMNAIMYGG----KKSVAVSIVYGAFDLVEKKEKKDPVA 60
R A R +V + N++M G KK + V IV AF+++ ++P+
Sbjct: 55 RYAAKRFRKA----QCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQ 110
Query: 61 LFRQALINVTPQFEVRTRRVGGAAYSVPGEITSKRSQALAIRWLIMAARK---RNETTMI 117
+ A+IN P+ + G +++ R AI L AR+ RN T+
Sbjct: 111 VLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIA 170
Query: 118 DRLGGEIIDAANN--RGVAVRKREETHKVAEANR 149
+ L E+I+AA A++K++E +VA++NR
Sbjct: 171 ECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204