RPSBLAST alignment of GI: 254780265 and protein with PDBid: 1iqv

>1iqv_A Ribosomal protein S7; RNA-binding, decoding center, helix-turn- helix, ribosome; 2.10A {Pyrococcus horikoshii} SCOP: a.75.1.1 Length = 218

 Score =  153 bits (388), Expect = 2e-38
 Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 5/127 (3%)

Query: 28  NAIMYGGKKSVAVSIVYGAFDLVEKKEKKDPVALFRQALINVTPQFEVRTRRVGGAAYSV 87
                  KK  A  +V  AF ++EK+  K+P+ +   A+ N  P+ +  +   GG  Y V
Sbjct: 92  EHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHV 151

Query: 88  PGEITSKRSQALAIRWLIMAARK---RNETTMIDRLGGEIIDAANN--RGVAVRKREETH 142
             +I+  R   +A+R + + A     R + +  + L  EII AAN   +  A  K+ E  
Sbjct: 152 AVDISPLRRLDVALRNIALGASAKCYRTKMSFAEALAEEIILAANKDPKSYAYSKKLEIE 211

Query: 143 KVAEANR 149
           ++AE++R
Sbjct: 212 RIAESSR 218