HHsearch alignment for GI: 254780266 and conserved domain: CHL00051

>CHL00051 rps12 ribosomal protein S12.
Probab=100.00  E-value=0  Score=414.25  Aligned_cols=123  Identities=66%  Similarity=1.092  Sum_probs=119.5

Q ss_pred             CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCE
Q ss_conf             95502354268737864666677000686212478756751845674424328899966996999980788875464678
Q gi|254780266|r    1 MPTVNQLIRKPRKGSFRACAKVTALRGNPQKRGVCLRVYTVTPKKPNSALRKVIKARLTSGVEVIAYVPGEGHNLQEHSV   80 (124)
Q Consensus         1 MpTinQlir~~Rkk~~~~~~K~~~L~~~PqkkGVclkv~~~~PKKPNSA~RKvarV~Lsng~~v~ayIPGeGhnlqehs~   80 (124)
T Consensus         1 M~TinQl~r~~r~~~~-~k~k~~aL~~~Pq~kGvclkv~~~tPKKPNSA~RKvakVrLsng~~v~ayIPGeghnlqehs~   79 (123)
T CHL00051          1 MPTIKQLIRNTRQPIR-NKTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSV   79 (123)
T ss_pred             CCCHHHHHHCCCCCCC-CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCE
T ss_conf             9657787633776665-557685224796525588998750678998310217999953898999981798768531578


Q ss_pred             EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99953783888875478980400144334200121125610789
Q gi|254780266|r   81 VMLCGGRVKDLPGVKYRVIRGVLDAQGVKNRKQARSRYGAERPK  124 (124)
Q Consensus        81 VLvrGGrv~DlPGVry~ivRG~~D~~gv~~Rk~~RSkYG~kkpk  124 (124)
T Consensus        80 VLvrGGrv~DLPGVky~ivRG~~D~~gv~~R~~~RSkYG~KkpK  123 (123)
T CHL00051         80 VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVKKPK  123 (123)
T ss_pred             EEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf             99938876879983279960420255446552134315667899