HHsearch alignment for GI: 254780266 and conserved domain: CHL00051
>CHL00051 rps12 ribosomal protein S12.
Probab=100.00 E-value=0 Score=414.25 Aligned_cols=123 Identities=66% Similarity=1.092 Sum_probs=119.5
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCE
Q ss_conf 95502354268737864666677000686212478756751845674424328899966996999980788875464678
Q gi|254780266|r 1 MPTVNQLIRKPRKGSFRACAKVTALRGNPQKRGVCLRVYTVTPKKPNSALRKVIKARLTSGVEVIAYVPGEGHNLQEHSV 80 (124)
Q Consensus 1 MpTinQlir~~Rkk~~~~~~K~~~L~~~PqkkGVclkv~~~~PKKPNSA~RKvarV~Lsng~~v~ayIPGeGhnlqehs~ 80 (124)
T Consensus 1 M~TinQl~r~~r~~~~-~k~k~~aL~~~Pq~kGvclkv~~~tPKKPNSA~RKvakVrLsng~~v~ayIPGeghnlqehs~ 79 (123)
T CHL00051 1 MPTIKQLIRNTRQPIR-NKTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSV 79 (123)
T ss_pred CCCHHHHHHCCCCCCC-CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCE
T ss_conf 9657787633776665-557685224796525588998750678998310217999953898999981798768531578
Q ss_pred EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99953783888875478980400144334200121125610789
Q gi|254780266|r 81 VMLCGGRVKDLPGVKYRVIRGVLDAQGVKNRKQARSRYGAERPK 124 (124)
Q Consensus 81 VLvrGGrv~DlPGVry~ivRG~~D~~gv~~Rk~~RSkYG~kkpk 124 (124)
T Consensus 80 VLvrGGrv~DLPGVky~ivRG~~D~~gv~~R~~~RSkYG~KkpK 123 (123)
T CHL00051 80 VLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVKKPK 123 (123)
T ss_pred EEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 99938876879983279960420255446552134315667899