HHsearch results for GI: 254780266 and protein with PDBid: 2vqe_L
>2vqe_L 30S ribosomal protein S12, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: i.1.1.1 PDB: 1gix_O* 1hnw_L* 1hnx_L* 1hnz_L* 1hr0_L 1ibk_L* 1ibl_L* 1ibm_L 1j5e_L 1jgo_O* 1jgp_O* 1jgq_O* 1mj1_O* 1ml5_O* 1mvr_O 1n32_L* 1n33_L* 1n34_L 1n36_L 1xmo_L* ...
Probab=100.00 E-value=0 Score=414.85 Aligned_cols=123 Identities=67% Similarity=1.086 Sum_probs=119.5
Q ss_pred CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCE
Q ss_conf 95502354268737864666677000686212478756751845674424328899966996999980788875464678
Q gi|254780266|r 1 MPTVNQLIRKPRKGSFRACAKVTALRGNPQKRGVCLRVYTVTPKKPNSALRKVIKARLTSGVEVIAYVPGEGHNLQEHSV 80 (124)
Q Consensus 1 MpTinQlir~~Rkk~~~~~~K~~~L~~~PqkkGVclkv~~~~PKKPNSA~RKvarV~Lsng~~v~ayIPGeGhnlqehs~ 80 (124)
|||||||++++|++.. .+.++++|++|||++|||++|++++|||||||+||||+|+||||++||||||||||||||||+
T Consensus 4 M~T~nQl~r~~R~~~~-~k~k~~aL~~~PqkkGvc~kv~~~tPKKPNSA~RKvarVrLsng~~vtayIPGeGhnlqEHs~ 82 (135)
T 2vqe_L 4 LPTINQLVRKGREKVR-KKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSV 82 (135)
T ss_dssp -CCHHHHHHTCCCCCC-CCCSCCCSSSCSEEEEEESCCCEECCCTTCCCCEECCEEEETTSCEEEEECCSSCCCCCTTCE
T ss_pred CCCHHHHHCCCCCCCC-CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCCE
T ss_conf 4768897514888776-567785023797415588997774689965300137899936997999981899867554788
Q ss_pred EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99953783888875478980400144334200121125610789
Q gi|254780266|r 81 VMLCGGRVKDLPGVKYRVIRGVLDAQGVKNRKQARSRYGAERPK 124 (124)
Q Consensus 81 VLvrGGrv~DlPGVry~ivRG~~D~~gv~~Rk~~RSkYG~kkpk 124 (124)
|||||||++|||||+||+|||+|||+||.+|+++|||||+|+||
T Consensus 83 VLvrGGrv~DLPGVry~vvRG~~D~~gV~~Rk~~RSkYG~Kkpk 126 (135)
T 2vqe_L 83 VLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK 126 (135)
T ss_dssp EEEEECCCTTSTTCCEEECTTSTTSCCCTTCCSSGGGGTCCCCC
T ss_pred EEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99928877889984079964112243346642145546646852