HHsearch alignment for GI: 254780267 and conserved domain: COG1566

>COG1566 EmrA Multidrug resistance efflux pump [Defense mechanisms].

Probab=94.48  E-value=0.051  Score=32.67  Aligned_cols=31  Identities=23%  Similarity=0.388  Sum_probs=16.4

Q ss_pred             CCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEE
Q ss_conf             62687046256774036764100012442010434899
Q gi|254780267|r   89 YHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLI  126 (171)
Q Consensus        89 ~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~i  126 (171)
T Consensus       208 ~T~IrAP~dG~V-------~~~~v~~G~~V~~G~~l~a  238 (352)
T COG1566         208 RTVIRAPVDGYV-------TNLSVRVGQYVSAGTPLMA  238 (352)
T ss_pred             CCEEECCCCCEE-------EEECCCCCCEECCCCCEEE
T ss_conf             789987789669-------7003557875048973499