HHsearch alignment for GI: 254780267 and conserved domain: PRK05352

>PRK05352 Na(+)-translocating NADH-quinone reductase subunit A; Provisional.
Probab=97.56  E-value=0.00022  Score=47.06  Aligned_cols=57  Identities=32%  Similarity=0.384  Sum_probs=39.0

Q ss_pred             CCEECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECCCC
Q ss_conf             10001244201043489997377268999899819999984898683699729999534788
Q gi|254780267|r  109 DPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEKTGDN  170 (171)
Q Consensus       109 ~~~V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~~~~~~  170 (171)
T Consensus        43 kl~VkeGD~V~~Gq~Lf~dK~~-~~v~~~SPvSG~V~~I~r--G~kR~i--lsIvIe~d~d~   99 (448)
T PRK05352         43 TMKVKEGDKVKKGQPLFEDKKN-PGVKFTAPASGTVSAINR--GEKRVL--QSVVIEVEGDE   99 (448)
T ss_pred             CEEECCCCEECCCCEEEECCCC-CCEEEECCCCEEEEEEEC--CCCCCE--EEEEEEECCCC
T ss_conf             5685579997479855653898-962696889829952205--887413--58999966874