HHsearch alignment for GI: 254780267 and conserved domain: PRK10476
>PRK10476 multidrug resistance protein MdtN; Provisional.
Probab=97.36 E-value=0.00025 Score=46.71 Aligned_cols=37 Identities=19% Similarity=0.194 Sum_probs=27.3
Q ss_pred CCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCC
Q ss_conf 66268704625677403676410001244201043489997377
Q gi|254780267|r 88 NYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMK 131 (171)
Q Consensus 88 ~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMK 131 (171)
T Consensus 209 ~~t~I~AP~dG~V~~-------~~v~~G~~V~pG~pl~~lv~~~ 245 (348)
T PRK10476 209 EDTTVRAPFDGRVVG-------LKVSVGEFAAPMQPIFTLIDTD 245 (348)
T ss_pred HCCEEECCCCEEEEE-------EECCCCCEECCCCEEEEEEECC
T ss_conf 558997789849998-------8669998778998489999689