HHsearch alignment for GI: 254780267 and conserved domain: PRK11556

>PRK11556 multidrug efflux system subunit MdtA; Provisional.
Probab=97.85  E-value=3.7e-05  Score=51.75  Aligned_cols=76  Identities=29%  Similarity=0.394  Sum_probs=59.7

Q ss_pred             CCCCCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCC---------------------------------
Q ss_conf             45466268704625677403676410001244201043489997377---------------------------------
Q gi|254780267|r   85 SPDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMK---------------------------------  131 (171)
Q Consensus        85 ~~~~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMK---------------------------------  131 (171)
T Consensus        83 ~a~~~v~v~~~VsG~I-------~~i~v~~Gd~VkkGqvLa~iD~~~~~~~l~qA~A~l~~a~A~l~~A~~~~~R~~~L~  155 (415)
T PRK11556         83 TAANTVTVRSRVDGQL-------MALHFQEGQQVKAGDLLAEIDPSQFKVALAQAQGQLAKDQATLANARRDLARYQQLA  155 (415)
T ss_pred             EEEEEEEEEEEEEEEE-------EEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             8646999987850299-------999858989978999999988357899999999999999989999999999999987


Q ss_pred             --------------------------------------EEEEEECCCCCEEEEEECCCCCCCCCCC--EEEEEEEC
Q ss_conf             --------------------------------------2689998998199999848986836997--29999534
Q gi|254780267|r  132 --------------------------------------TMNHIVAPCSGKVQDINVKDGQSVEYGD--ALLVLEKT  167 (171)
Q Consensus       132 --------------------------------------m~n~I~a~~~G~I~~i~v~~G~~V~~gq--~L~~i~~~  167 (171)
T Consensus       156 ~~~~iS~~~ld~~~a~~~~A~A~l~~a~a~l~~A~~~L~~t~I~AP~~GvV~~r~v~~G~~V~~G~~~pl~~i~~~  231 (415)
T PRK11556        156 KTNLVSRQELDAQQALVSETEGTIKADEAAVASAQLQLDWSRITAPISGRVGLKQVDVGNQISSGDTTGIVVITQT  231 (415)
T ss_pred             HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCEECCCCCCCEEEEECC
T ss_conf             6599569999989999999999999999999999875248899826651577688589973777886526999527