HHsearch alignment for GI: 254780267 and conserved domain: PRK11556
>PRK11556 multidrug efflux system subunit MdtA; Provisional.
Probab=96.81 E-value=0.0025 Score=40.66 Aligned_cols=46 Identities=20% Similarity=0.344 Sum_probs=36.8
Q ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEECC
Q ss_conf 34899973772689998998199999848986836997299995347
Q gi|254780267|r 122 QTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEKTG 168 (171)
Q Consensus 122 ~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~~~~ 168 (171)
T Consensus 77 ~~~Gtv~a~~-~v~v~~~VsG~I~~i~v~~Gd~VkkGqvLa~iD~~~ 122 (415)
T PRK11556 77 TGLGTVTAAN-TVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPSQ 122 (415)
T ss_pred EEEEEEEEEE-EEEEEEEEEEEEEEEECCCCCEECCCCEEEEECCHH
T ss_conf 9999998646-999987850299999858989978999999988357