HHsearch alignment for GI: 254780267 and conserved domain: TIGR01348
>TIGR01348 PDHac_trf_long pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; InterPro: IPR006256 This group of sequences are a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and percent identity (UPGMA) trees. Members contain two or three copies of the lipoyl-binding domain. Escherichia coli AceF is included in this set while mitochondrial and some other bacterial forms are excluded. dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; GO: 0004742 dihydrolipoyllysine-residue acetyltransferase activity, 0006096 glycolysis, 0045254 pyruvate dehydrogenase complex.
Probab=99.13 E-value=5.6e-10 Score=81.00 Aligned_cols=83 Identities=31% Similarity=0.453 Sum_probs=69.5
Q ss_pred CCCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEE
Q ss_conf 46626870462567740367641000124420104348999737726899989981999998489868369972999953
Q gi|254780267|r 87 DNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEK 166 (171)
Q Consensus 87 ~~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~~ 166 (171)
T Consensus 204 sg~~~v~vPDiGdn~~-~~~V~evlV~vGDtV~~~QslItLE~DKA~~EvPa~asGvv~~v~v~vGD~v~~G~~il~L~~ 282 (655)
T TIGR01348 204 SGVQEVKVPDIGDNIE-KVEVIEVLVKVGDTVSADQSLITLESDKASMEVPAPASGVVKSVKVKVGDSVSTGDLILVLSV 282 (655)
T ss_pred CCCEEEECCCCCCCCC-CEEEEEEEECCCCEECCCCCEEEEECCEEEEEECCCCCCEEEEEEEEECCEECCCCEEEEEEE
T ss_conf 5741544265377777-502799995437776478867887067147874689852378999865667057888999710
Q ss_pred CCCC
Q ss_conf 4788
Q gi|254780267|r 167 TGDN 170 (171)
Q Consensus 167 ~~~~ 170 (171)
T Consensus 283 ~~st 286 (655)
T TIGR01348 283 AGST 286 (655)
T ss_pred CCCC
T ss_conf 5677