HHsearch alignment for GI: 254780267 and conserved domain: cd06848
>cd06848 GCS_H Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue.
Probab=97.38 E-value=0.00022 Score=47.02 Aligned_cols=40 Identities=25% Similarity=0.396 Sum_probs=36.4
Q ss_pred ECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCC
Q ss_conf 0124420104348999737726899989981999998489
Q gi|254780267|r 112 VNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKD 151 (171)
Q Consensus 112 V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~ 151 (171)
T Consensus 37 p~~g~~v~~g~~~~~iEs~k~~~~i~sPv~G~vv~~N~~l 76 (96)
T cd06848 37 PEVGTEVKKGDPFGSVESVKAASDLYSPVSGEVVEVNEAL 76 (96)
T ss_pred CCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEHHHH
T ss_conf 7999701389859999963357887377166999837965