HHsearch results for GI: 254780267 and protein with PDBid: 1bdo_A

>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hammerhead structure, selenomethionine, ligase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.95  E-value=3.8e-28  Score=190.01  Aligned_cols=78  Identities=49%  Similarity=0.705  Sum_probs=76.0

Q ss_pred             CCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEE
Q ss_conf             662687046256774036764100012442010434899973772689998998199999848986836997299995
Q gi|254780267|r   88 NYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLE  165 (171)
Q Consensus        88 ~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~~i~  165 (171)
                      .++.|+|||+|+|||+|+|+.++||++||+|++||+||+||||||+++|.||++|+|.+|+|++|+.|++||+||+||
T Consensus         3 sg~~V~aPm~G~~~~~~~p~~~~~V~~Gd~V~~g~~l~~iEamK~~~~i~a~~~G~V~~i~v~~G~~V~~G~~L~~ie   80 (80)
T 1bdo_A            3 SGHIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE   80 (80)
T ss_dssp             CSEEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred             CCCEEECCCCEEEEECCCCCCCCEECCCCEEECCCEEEEEEECCCHHHCCCCCCEEEEEEEECCCCEECCCCEEEEEC
T ss_conf             899985898779981469999853268999966878999997620120659999899899868979989999999979