HHsearch results for GI: 254780267 and protein with PDBid: 1zko_A

>1zko_A Glycine cleavage system H protein; TM0212, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A

Probab=97.38  E-value=0.00017  Score=46.41  Aligned_cols=58  Identities=28%  Similarity=0.456  Sum_probs=45.3

Q ss_pred             ECCCCCEEECCEEEEEECCCEEEEEECCCCCEEEEEECC---CCCCC---CCCC-EEEEEEECCC
Q ss_conf             012442010434899973772689998998199999848---98683---6997-2999953478
Q gi|254780267|r  112 VNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVK---DGQSV---EYGD-ALLVLEKTGD  169 (171)
Q Consensus       112 V~vGd~Vk~G~~l~iiEAMKm~n~I~a~~~G~I~~i~v~---~G~~V---~~gq-~L~~i~~~~~  169 (171)
                      -.+|++|++|+.++.||+-|.-.+|.||++|+|.+++-+   +-+.+   -||+ =||+|++++.
T Consensus        53 p~~G~~v~~g~~~~~iEs~K~~~~i~sPvsG~Vv~vN~~l~~~P~liN~dPy~~gWl~~ik~~d~  117 (136)
T 1zko_A           53 PEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDE  117 (136)
T ss_dssp             CCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEESCG
T ss_pred             CCCCCEEECCCEEEEEEECCCEEEEECCCCEEEEEEHHHHHCCHHHHCCCCCCCCEEEEEEECCH
T ss_conf             99998865597689999866157775035459998656443197875389889978999998987