HHsearch results for GI: 254780267 and protein with PDBid: 3cdx_A
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=97.77 E-value=0.00016 Score=46.48 Aligned_cols=72 Identities=22% Similarity=0.108 Sum_probs=58.0
Q ss_pred CCCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECC----CEEEEEECCCCCEEEEEECCCCCCCCCCCEEE
Q ss_conf 46626870462567740367641000124420104348999737----72689998998199999848986836997299
Q gi|254780267|r 87 DNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAM----KTMNHIVAPCSGKVQDINVKDGQSVEYGDALL 162 (171)
Q Consensus 87 ~~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAM----Km~n~I~a~~~G~I~~i~v~~G~~V~~gq~L~ 162 (171)
+....+.||--|.|+ +.++.||.|++||+|+.|-.. ....++.||.+|.|...... -.|..|+.|+
T Consensus 265 ~~~~~v~A~~~Gl~~--------~~v~lG~~V~kGq~ig~I~d~d~~g~~~~~v~Ap~dGivl~~~~~--~~V~~Gd~la 334 (354)
T 3cdx_A 265 EADAYVMAPRTGLFE--------PTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFGAGP--GRVTRGDAVA 334 (354)
T ss_dssp CGGGEEECSSCEEEE--------ESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEEECS--SEECTTCEEE
T ss_pred CCCCEEECCCCEEEE--------ECCCCCCEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCC--CCCCCCCEEE
T ss_conf 475222279987999--------807879994899999999567888970499987998599972588--8306899699
Q ss_pred EEEECC
Q ss_conf 995347
Q gi|254780267|r 163 VLEKTG 168 (171)
Q Consensus 163 ~i~~~~ 168 (171)
.|=.+-
T Consensus 335 ~Ia~d~ 340 (354)
T 3cdx_A 335 VVMEDY 340 (354)
T ss_dssp EEEEEC
T ss_pred EEEEEC
T ss_conf 996488