HHsearch results for GI: 254780267 and protein with PDBid: 3d4r_A

>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=91.91  E-value=0.2  Score=27.68  Aligned_cols=39  Identities=31%  Similarity=0.390  Sum_probs=33.7

Q ss_pred             CEECCCCCEEECCEEEEEECCCEEE-EEECCCCCEEEEEE
Q ss_conf             0001244201043489997377268-99989981999998
Q gi|254780267|r  110 PFVNKGNLVVEGQTLLIIEAMKTMN-HIVAPCSGKVQDIN  148 (171)
Q Consensus       110 ~~V~vGd~Vk~G~~l~iiEAMKm~n-~I~a~~~G~I~~i~  148 (171)
                      +++.+||+|.+||.|+.|..=|-+. -|.||++|+|.-+.
T Consensus       114 ~i~~~G~rV~~gd~lA~i~T~KGEVR~i~spv~G~Vv~v~  153 (169)
T 3d4r_A          114 PIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMN  153 (169)
T ss_dssp             ECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred             EECCCCCEECCCCEEEEEEECCCCEEEECCCCCEEEEEEE
T ss_conf             9757553761487279998268507994499857999997