HHsearch results for GI: 254780267 and protein with PDBid: 3d4r_A
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=91.91 E-value=0.2 Score=27.68 Aligned_cols=39 Identities=31% Similarity=0.390 Sum_probs=33.7
Q ss_pred CEECCCCCEEECCEEEEEECCCEEE-EEECCCCCEEEEEE
Q ss_conf 0001244201043489997377268-99989981999998
Q gi|254780267|r 110 PFVNKGNLVVEGQTLLIIEAMKTMN-HIVAPCSGKVQDIN 148 (171)
Q Consensus 110 ~~V~vGd~Vk~G~~l~iiEAMKm~n-~I~a~~~G~I~~i~ 148 (171)
+++.+||+|.+||.|+.|..=|-+. -|.||++|+|.-+.
T Consensus 114 ~i~~~G~rV~~gd~lA~i~T~KGEVR~i~spv~G~Vv~v~ 153 (169)
T 3d4r_A 114 PIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMN 153 (169)
T ss_dssp ECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEE
T ss_pred EECCCCCEECCCCEEEEEEECCCCEEEECCCCCEEEEEEE
T ss_conf 9757553761487279998268507994499857999997