HHsearch results for GI: 254780267 and protein with PDBid: 3fmc_A
>3fmc_A Putative succinylglutamate desuccinylase / aspartoacylase; YP_926482.1, structural genomics, joint center for structural genomics; HET: MSE; 1.80A {Shewanella amazonensis SB2B} PDB: 3lwu_A*
Probab=97.94 E-value=4.9e-05 Score=49.69 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=56.5
Q ss_pred CCCCEEEECCCEEEEEECCCCCCCEECCCCCEEECCEEEEEECC------CEEEEEECCCCCEEEEEECCCCCCCCCCCE
Q ss_conf 46626870462567740367641000124420104348999737------726899989981999998489868369972
Q gi|254780267|r 87 DNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAM------KTMNHIVAPCSGKVQDINVKDGQSVEYGDA 160 (171)
Q Consensus 87 ~~~~~I~SPmvGtfy~~psP~~~~~V~vGd~Vk~G~~l~iiEAM------Km~n~I~a~~~G~I~~i~v~~G~~V~~gq~ 160 (171)
.+...+.||.-|.|+ +.++.||.|++||+|+.|--. -...+|.||.+|+| +....+-.|..|++
T Consensus 288 ~~~~~v~a~~~Gl~~--------~~~~~G~~V~~G~~lg~i~d~~~~~~g~~~~~v~ap~dGiv--~~~~~~~~V~~Gd~ 357 (368)
T 3fmc_A 288 KNYRKFHAPKAGMVE--------YLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVP--ILHFASASVHQGTE 357 (368)
T ss_dssp GGEEEEECSSCEEEE--------ECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEE--EEECSSSEECTTCE
T ss_pred CCCEEEECCCCEEEE--------ECCCCCCEECCCCEEEEEECCCCCCCCCCEEEEEECCCCEE--EECCCCCCCCCCCE
T ss_conf 688799589985888--------77999799789988999977876777874089995899889--98058873079999
Q ss_pred EEEEE
Q ss_conf 99995
Q gi|254780267|r 161 LLVLE 165 (171)
Q Consensus 161 L~~i~ 165 (171)
|+.|=
T Consensus 358 l~~i~ 362 (368)
T 3fmc_A 358 LYKVM 362 (368)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 99886