RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780267|ref|YP_003064680.1| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Candidatus Liberibacter asiaticus str. psy62] (171 letters) >gnl|CDD|30857 COG0511, AccB, Biotin carboxyl carrier protein [Lipid metabolism]. Length = 140 Score = 110 bits (277), Expect = 1e-25 Identities = 54/154 (35%), Positives = 74/154 (48%), Gaps = 14/154 (9%) Query: 13 IRNLANILNETNLTEVEIDNDGMRIRLLRSPQKDTVTNYYSEDNKNNHSLVGFPPSSTID 72 I+ L ++ E++ TE E+ + +RL R + ++ S P+++ Sbjct: 1 IKELIKLVVESDGTEFEVKVEEGEVRLSRKTPVVQDVPAPAPIEASSPSAAAAQPAASAP 60 Query: 73 NTPPESDLIPLLSPDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKT 132 P + VTSPMVGT Y PFV G+ V GQTL IIEAMK Sbjct: 61 APAPAA-------AAGGTQVTSPMVGTVYK-------PFVEVGDTVKAGQTLAIIEAMKM 106 Query: 133 MNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEK 166 N I AP G V++I VK+G VEYGD L V+E Sbjct: 107 ENEIEAPADGVVKEILVKNGDPVEYGDPLAVIEP 140 >gnl|CDD|133459 cd06850, biotinyl_domain, The biotinyl-domain or biotin carboxyl carrier protein (BCCP) domain is present in all biotin-dependent enzymes, such as acetyl-CoA carboxylase, pyruvate carboxylase, propionyl-CoA carboxylase, methylcrotonyl-CoA carboxylase, geranyl-CoA carboxylase, oxaloacetate decarboxylase, methylmalonyl-CoA decarboxylase, transcarboxylase and urea amidolyase. This domain functions in transferring CO2 from one subsite to another, allowing carboxylation, decarboxylation, or transcarboxylation. During this process, biotin is covalently attached to a specific lysine. Length = 67 Score = 90.6 bits (226), Expect = 2e-19 Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 7/74 (9%) Query: 91 TVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVK 150 VT+PM GT V +G+ V GQ L ++EAMK N + AP +G V++I VK Sbjct: 1 EVTAPMPGTVV-------KVLVKEGDKVEAGQPLAVLEAMKMENEVTAPVAGVVKEILVK 53 Query: 151 DGQSVEYGDALLVL 164 +G VE G L+V+ Sbjct: 54 EGDQVEAGQLLVVI 67 Score = 43.9 bits (105), Expect = 2e-05 Identities = 14/31 (45%), Positives = 17/31 (54%) Query: 135 HIVAPCSGKVQDINVKDGQSVEYGDALLVLE 165 + AP G V + VK+G VE G L VLE Sbjct: 1 EVTAPMPGTVVKVLVKEGDKVEAGQPLAVLE 31 >gnl|CDD|144088 pfam00364, Biotin_lipoyl, Biotin-requiring enzyme. This family covers two Prosite entries, the conserved lysine residue binds biotin in one group and lipoic acid in the other. Note that the model may not recognize the Glycine cleavage system H proteins. Length = 73 Score = 80.3 bits (199), Expect = 3e-16 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 2/75 (2%) Query: 90 HTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINV 149 + SPM+G + ++ V G+ V GQ L +EAMK I AP +G V++I V Sbjct: 1 TEIKSPMIGESV--KEGTAEWLVKVGDKVKAGQVLCEVEAMKMEMEIPAPVAGVVKEILV 58 Query: 150 KDGQSVEYGDALLVL 164 K+G +VE GD L + Sbjct: 59 KEGDTVEVGDPLAKI 73 Score = 25.3 bits (56), Expect = 9.3 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 5/37 (13%) Query: 134 NHIVAPCSGKV-----QDINVKDGQSVEYGDALLVLE 165 I +P G+ + VK G V+ G L +E Sbjct: 1 TEIKSPMIGESVKEGTAEWLVKVGDKVKAGQVLCEVE 37 >gnl|CDD|34383 COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism]. Length = 645 Score = 61.1 bits (148), Expect = 2e-10 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 7/82 (8%) Query: 84 LSPDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGK 143 ++ + + +PM GT + V +G V G L+++EAMK N + AP G Sbjct: 570 VAAASSGELLAPMPGTVVSVA-------VKEGQEVSAGDLLVVLEAMKMENTLRAPRDGV 622 Query: 144 VQDINVKDGQSVEYGDALLVLE 165 V + V +G V G L+ E Sbjct: 623 VAKLAVAEGDQVAVGTVLVEFE 644 >gnl|CDD|31240 COG1038, PycA, Pyruvate carboxylase [Energy production and conversion]. Length = 1149 Score = 61.0 bits (148), Expect = 2e-10 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%) Query: 86 PDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQ 145 P N + +PM G + V KG+ V +G L +IEAMK I AP G V+ Sbjct: 1076 PGNPGHIGAPMPGVV-------VEVKVKKGDKVKKGDVLAVIEAMKMETTISAPFDGTVK 1128 Query: 146 DINVKDGQSVEYGDALLVLEK 166 ++ VKDG ++ GD L+V+E+ Sbjct: 1129 EVLVKDGDQIDGGDLLVVVEE 1149 >gnl|CDD|35590 KOG0369, KOG0369, KOG0369, Pyruvate carboxylase [Energy production and conversion]. Length = 1176 Score = 53.4 bits (128), Expect = 3e-08 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Query: 82 PLLSPDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNHIVAPCS 141 P P + +PM GT + V +G V +GQ L ++ AMK I +P + Sbjct: 1099 PKADPGVKGHIGAPMPGTVI-------EIKVKEGAKVKKGQPLAVLSAMKMEMVISSPHA 1151 Query: 142 GKVQDINVKDGQSVEYGDALLVLE 165 G V+ ++V G VE GD ++ LE Sbjct: 1152 GTVKKVHVVQGTKVEGGDLIVELE 1175 >gnl|CDD|35459 KOG0238, KOG0238, KOG0238, 3-Methylcrotonyl-CoA carboxylase, biotin-containing subunit/Propionyl-CoA carboxylase, alpha chain/Acetyl-CoA carboxylase, biotin carboxylase subunit [Lipid transport and metabolism, Amino acid transport and metabolism]. Length = 670 Score = 52.7 bits (126), Expect = 5e-08 Identities = 29/96 (30%), Positives = 41/96 (42%), Gaps = 10/96 (10%) Query: 73 NTPPESDLIPLLSP---DNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEA 129 P L P S D + +PM G V G+ V EGQ L+++ A Sbjct: 582 EVLPPKYLSPQSSETKEDGSGVIVAPMPGII-------EKVLVKPGDKVKEGQELVVLIA 634 Query: 130 MKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLE 165 MK + + AP G V+D+ K G +V G L+ E Sbjct: 635 MKMEHSLKAPKDGTVKDVKYKAGATVGDGAVLVEFE 670 >gnl|CDD|133456 cd06663, Biotinyl_lipoyl_domains, Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases, and the H-protein of the glycine cleavage system (GCS). These domains transport CO2, acyl, or methylamine, respectively, between components of the complex/protein via a biotinyl or lipoyl group, which is covalently attached to a highly conserved lysine residue. Length = 73 Score = 49.0 bits (117), Expect = 6e-07 Identities = 20/54 (37%), Positives = 29/54 (53%) Query: 111 FVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVL 164 G+ V +G L IEAMK + + AP SG V+ + VK+G VE L+ + Sbjct: 20 LKKVGDKVKKGDVLAEIEAMKATSDVEAPKSGTVKKVLVKEGTKVEGDTPLVKI 73 >gnl|CDD|133458 cd06849, lipoyl_domain, Lipoyl domain of the dihydrolipoyl acyltransferase component (E2) of 2-oxo acid dehydrogenases. 2-oxo acid dehydrogenase multienzyme complexes, like pyruvate dehydrogenase (PDH), 2-oxoglutarate dehydrogenase (OGDH) and branched-chain 2-oxo acid dehydrogenase (BCDH), contain at least three different enzymes, 2-oxo acid dehydrogenase (E1), dihydrolipoyl acyltransferase (E2) and dihydrolipoamide dehydrogenase (E3) and play a key role in redox regulation. E2, the central component of the complex, catalyzes the transfer of the acyl group of CoA from E1 to E3 via reductive acetylation of a lipoyl group covalently attached to a lysine residue. Length = 74 Score = 44.3 bits (106), Expect = 2e-05 Identities = 17/54 (31%), Positives = 28/54 (51%) Query: 111 FVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVL 164 V +G+ V EG L +E K + AP +G + I V++G +V G + V+ Sbjct: 21 LVKEGDSVEEGDVLAEVETDKATVEVEAPAAGVLAKILVEEGDTVPVGQVIAVI 74 Score = 28.9 bits (66), Expect = 0.75 Identities = 11/25 (44%), Positives = 15/25 (60%) Query: 141 SGKVQDINVKDGQSVEYGDALLVLE 165 G + + VK+G SVE GD L +E Sbjct: 14 EGTIVEWLVKEGDSVEEGDVLAEVE 38 >gnl|CDD|30854 COG0508, AceF, Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [Energy production and conversion]. Length = 404 Score = 44.2 bits (104), Expect = 2e-05 Identities = 17/59 (28%), Positives = 29/59 (49%) Query: 111 FVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLEKTGD 169 G+ V EG L+ +E K + AP +G + I V++G +V G + +E+ G Sbjct: 23 LKKVGDKVKEGDVLVEVETDKATMEVPAPDAGVLAKILVEEGDTVPVGAVIARIEEEGA 81 >gnl|CDD|109580 pfam00529, HlyD, HlyD family secretion protein. Length = 304 Score = 35.5 bits (82), Expect = 0.007 Identities = 13/33 (39%), Positives = 18/33 (54%) Query: 135 HIVAPCSGKVQDINVKDGQSVEYGDALLVLEKT 167 + SG V I VK+G V+ GD L+ L+ T Sbjct: 4 EVQPQVSGIVIRILVKEGDRVKAGDVLVRLDPT 36 >gnl|CDD|133457 cd06848, GCS_H, Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (GCS) found in bacteria, archea and the mitochondria of eukaryotes. GCS is a multienzyme complex consisting of 4 different components (P-, H-, T- and L-proteins) which catalyzes the oxidative cleavage of glycine. The H-protein shuttles the methylamine group of glycine from the P-protein (glycine dehydrogenase) to the T-protein (aminomethyltransferase) via a lipoyl group, attached to a completely conserved lysine residue. Length = 96 Score = 33.7 bits (78), Expect = 0.027 Identities = 10/38 (26%), Positives = 20/38 (52%) Query: 111 FVNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDIN 148 G V +G +E++K + + +P SG+V ++N Sbjct: 36 LPEVGTEVKKGDPFGSVESVKAASDLYSPVSGEVVEVN 73 >gnl|CDD|31754 COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]. Length = 352 Score = 33.4 bits (76), Expect = 0.032 Identities = 13/33 (39%), Positives = 19/33 (57%) Query: 135 HIVAPCSGKVQDINVKDGQSVEYGDALLVLEKT 167 I SG+V ++NVKD Q V+ GD L ++ Sbjct: 55 PIAPQVSGRVTEVNVKDNQLVKKGDVLFRIDPR 87 Score = 25.3 bits (55), Expect = 7.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Query: 136 IVAPCSGKVQDINVKDGQSVEYGDALLVL 164 I AP G V +++V+ GQ V G L+ L Sbjct: 211 IRAPVDGYVTNLSVRVGQYVSAGTPLMAL 239 >gnl|CDD|30855 COG0509, GcvH, Glycine cleavage system H protein (lipoate-binding) [Amino acid transport and metabolism]. Length = 131 Score = 32.9 bits (75), Expect = 0.051 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%) Query: 99 TAYLASSPGSDPFV---NKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDIN 148 T Y G FV G V G++L ++E++K + + AP SG+V ++N Sbjct: 31 TDYAQDQLGDIVFVELPEVGAEVKAGESLAVVESVKAASDVYAPVSGEVVEVN 83 >gnl|CDD|145006 pfam01635, Corona_M, Coronavirus M matrix/glycoprotein. This family consists of various coronavirus matrix proteins which are transmembrane glycoproteins. The M protein or E1 glycoprotein is The coronavirus M protein is implicated in virus assembly. The E1 viral membrane protein is required for formation of the viral envelope and is transported via the Golgi complex. Length = 221 Score = 31.9 bits (73), Expect = 0.086 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 13/101 (12%) Query: 76 PESDLIPLLSPDNYHTVTSPMVGTAYLASSPGSDPFVNKGNLVVEGQTLLIIEAMKTMNH 135 PE++ + L P TV P+ G P + +G L +EGQ L + + Sbjct: 112 PETNAL-LNIPLLGRTVVRPIEE-----DPTGVTPTILRGVLYMEGQKLARGCDVDDLPK 165 Query: 136 IVAPCSGKVQDINV-KDGQSVEYGD----ALLVLEKTGDNK 171 V K V K G+SV G+ A+ V K G+ + Sbjct: 166 YVTVA--KPSTTIVYKRGKSVNSGNKSGFAVYVRYKHGNYR 204 >gnl|CDD|35589 KOG0368, KOG0368, KOG0368, Acetyl-CoA carboxylase [Lipid transport and metabolism]. Length = 2196 Score = 31.9 bits (72), Expect = 0.093 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%) Query: 112 VNKGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYGDALLVLE 165 V G V GQ IE MK + +VA G++Q I ++G ++E G L L Sbjct: 701 VEDGEHVEAGQPYAEIEVMKMVMPLVAKEPGRIQLI-KQEGDAIEAGSVLAKLT 753 >gnl|CDD|38583 KOG3373, KOG3373, KOG3373, Glycine cleavage system H protein (lipoate-binding) [Amino acid transport and metabolism]. Length = 172 Score = 28.4 bits (63), Expect = 1.1 Identities = 13/40 (32%), Positives = 24/40 (60%) Query: 115 GNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVKDGQS 154 G V +G + +E++K + I +P SG+V +IN K ++ Sbjct: 91 GTEVSKGDSFGAVESVKAASEIYSPVSGEVTEINEKLEEN 130 >gnl|CDD|36847 KOG1634, KOG1634, KOG1634, Predicted transcription factor DATF1, contains PHD and TFS2M domains [Transcription]. Length = 778 Score = 27.4 bits (60), Expect = 2.1 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 1/45 (2%) Query: 53 SEDNKNNHSLVGFPPSSTIDNTPPESDLIPLLSPDNYHTVTSPMV 97 S+ ++ L P + + L P+L P + T+PMV Sbjct: 670 SDSVPSSRHLKSSPGGGSP-SFHFPPHLPPILPPPGFGFATNPMV 713 >gnl|CDD|110591 pfam01597, GCV_H, Glycine cleavage H-protein. This is a family of glycine cleavage H-proteins, part of the glycine cleavage multienzyme complex (GCV) found in bacteria and the mitochondria of eukaryotes. GCV catalyses the catabolism of glycine in eukaryotes. A lipoyl group is attached to a completely conserved lysine residue. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. Length = 122 Score = 27.3 bits (61), Expect = 2.1 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Query: 97 VG-TAYLASSPGSDPFVN---KGNLVVEGQTLLIIEAMKTMNHIVAPCSGKVQDINVK 150 VG T + G FV G V +G++L +E++K + + AP SG+V ++N K Sbjct: 20 VGITDFAQEELGDLVFVELPEVGTKVKKGESLGAVESVKAASEVYAPVSGEVVEVNEK 77 >gnl|CDD|31606 COG1416, COG1416, Uncharacterized conserved protein [Function unknown]. Length = 112 Score = 26.4 bits (58), Expect = 3.8 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 1/45 (2%) Query: 3 DKKQKINLTLIRNLANILNETNLTEVEIDNDGMRIRLLRSPQKDT 47 D++ K+N+ + NL N+L + E+E+ G I L Sbjct: 11 DEESKVNMV-LGNLTNLLEDDPSVEIEVVAHGPAIAFLSEKANIA 54 >gnl|CDD|177040 CHL00117, rpoC2, RNA polymerase beta'' subunit; Reviewed. Length = 1364 Score = 26.4 bits (59), Expect = 4.2 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Query: 98 GTAYLASSPGSDPFVNKGNLVVEGQTL--LIIEAMKT 132 YLA+ PG+ + G ++ EG TL LI E ++ Sbjct: 1093 AKPYLAT-PGATVHGHYGEILYEGDTLVTLIYEKSRS 1128 >gnl|CDD|38047 KOG2836, KOG2836, KOG2836, Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms]. Length = 173 Score = 26.5 bits (58), Expect = 4.3 Identities = 17/57 (29%), Positives = 24/57 (42%) Query: 28 VEIDNDGMRIRLLRSPQKDTVTNYYSEDNKNNHSLVGFPPSSTIDNTPPESDLIPLL 84 VEI MR + +P T+ + E K + V T D TP E + I +L Sbjct: 10 VEISYKNMRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEPTYDTTPLEKEGITVL 66 >gnl|CDD|33251 COG3448, COG3448, CBS-domain-containing membrane protein [Signal transduction mechanisms]. Length = 382 Score = 25.7 bits (56), Expect = 5.9 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 15/79 (18%) Query: 14 RNLANILNETNLTEVEIDNDGMRIRLLRSPQKDTVTNYYSEDNKNNHSLVGFPPSSTIDN 73 R L I+ + +L + + R+R LR P + P T+ Sbjct: 286 RRLVGIVTQRDLLKHARPSPFQRLRFLRPPTVKGIMT---------------TPVVTVRP 330 Query: 74 TPPESDLIPLLSPDNYHTV 92 P +L+P L+ + H + Sbjct: 331 DTPAVELVPRLADEGLHAL 349 >gnl|CDD|100027 cd00396, PurM-like, AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.. Length = 222 Score = 25.8 bits (57), Expect = 6.3 Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 6/51 (11%) Query: 118 VVEGQTLLIIEAMKTMNH---IVAPCSGKVQDINVKDGQSVEYGDALLVLE 165 +V G T + TM H + G V+ V D GD L++ Sbjct: 75 IVGGHT---SVSPGTMGHKLSLAVFAIGVVEKDRVIDSSGARPGDVLILTG 122 >gnl|CDD|145688 pfam02666, PS_Dcarbxylase, Phosphatidylserine decarboxylase. This is a family of phosphatidylserine decarboxylases, EC:4.1.1.65. These enzymes catalyse the reaction: Phosphatidyl-L-serine <=> phosphatidylethanolamine + CO2. Phosphatidylserine decarboxylase plays a central role in the biosynthesis of aminophospholipids by converting phosphatidylserine to phosphatidylethanolamine. Length = 201 Score = 25.3 bits (56), Expect = 7.9 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 23/94 (24%) Query: 84 LSPDNYHTVTSPMVGTA--------------YLASSPGSDPFV-NKGNLVV----EGQTL 124 LSP +YH +P+ GT LA S + F N+ ++V G+ Sbjct: 76 LSPFDYHRNHAPVDGTVKEVRHIPGKLYPVNPLALSKIPNLFAENERVVIVIETKFGKVA 135 Query: 125 LIIEAMKTMNHIVAPCSGKVQDINVKDGQSVEYG 158 ++ + IV K + VK G E G Sbjct: 136 VVQVGALNVGSIV--LYFKEEGDEVKKGD--ELG 165 >gnl|CDD|35462 KOG0241, KOG0241, KOG0241, Kinesin-like protein [Cytoskeleton]. Length = 1714 Score = 25.4 bits (55), Expect = 9.3 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 3/82 (3%) Query: 41 RSPQKDTVTNYY--SEDNKNNHSLVGFPPSSTIDNTPPESDLIPLLSPDNYHTVTSPMVG 98 RSP ++T+ Y + S + P S + D ++ + + ++ Sbjct: 1505 RSPTTSSITSGYFSHSASNATLSDMVVPSSDSSDQLAIQT-KDADSTEHSTPSLVHDGRP 1563 Query: 99 TAYLASSPGSDPFVNKGNLVVE 120 ++ + V +VVE Sbjct: 1564 SSDKELTEVEKGLVKDKIIVVE 1585 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.311 0.131 0.366 Gapped Lambda K H 0.267 0.0709 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 1,947,494 Number of extensions: 95733 Number of successful extensions: 216 Number of sequences better than 10.0: 1 Number of HSP's gapped: 207 Number of HSP's successfully gapped: 31 Length of query: 171 Length of database: 6,263,737 Length adjustment: 87 Effective length of query: 84 Effective length of database: 4,383,754 Effective search space: 368235336 Effective search space used: 368235336 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 54 (24.6 bits)