HHsearch alignment for GI: 254780268 and conserved domain: COG2232
>COG2232 Predicted ATP-dependent carboligase related to biotin carboxylase [General function prediction only].
Probab=99.86 E-value=1.8e-19 Score=158.67 Aligned_cols=339 Identities=18% Similarity=0.229 Sum_probs=221.5
Q ss_pred EEEEEEC--CCHHHHHHHHHHHHCCCEEEEE--CCCHHHCCCCHHHCCEEEECCCCCCC---CHHCCHHHHHHHHHH--C
Q ss_conf 0686644--7099999999888809659998--58557718776758579991899853---000698999999987--0
Q gi|254780268|r 3 SKILIAN--RGEIALRILRACKELGIPTVAV--HSTADSGAMHVRLADESVCIGPPSSK---DSYLNIQQIVAACEV--T 73 (443)
Q Consensus 3 ~~iLian--rGeia~riira~~elGi~tv~v--~s~~D~~a~~~~~ADe~~~i~~~~~~---~sYldi~~ii~~a~~--~ 73 (443)
T Consensus 12 ~kiLviGvntR~----vveSA~klGf~V~sv~~y~~~Dl~----~~a~~~l~~r~~~~~~rfe~-~de~~li~~~~~~~~ 82 (389)
T COG2232 12 CKILVIGVNTRP----VVESASKLGFEVYSVQYYDPADLP----GDAISYLRERPGELLGRFEN-LDEQKLIEAAEDLAE 82 (389)
T ss_pred CEEEEEEECCHH----HHHHHHHCCEEEEEEEEECCCCCC----CCCCEEEEECCHHHCCCCCC-CCHHHHHHHHHHHHH
T ss_conf 438999623417----677877447189986753432366----42102788448545276558-898999999986445
Q ss_pred CCCE-EECCCCHHHCCHHHHHHHHHCCCEEECCCHH-HHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 9989-9458531310976668898459216268989-9987218998877664224433243334557999873200330
Q gi|254780268|r 74 GADA-IHPGYGFLSENAKFAEILEDHHIKFIGPSSE-HIKIMGDKITAKKTAQQLGIPVVPGSGEVYPHTAMPIAKEIGF 151 (443)
Q Consensus 74 ~~da-ihPGyGfLsEn~~fa~~~e~~Gi~fIGPs~~-ai~~~gDK~~~k~~a~~~GVP~~p~~~~~~~~ea~~~a~~iGy 151 (443)
T Consensus 83 dvD~~ii~~sg~e~l~~~-----g~~~~~v~~n~P~~~v~~~snk~~~~r~l~~lgmp~p~~~-------~~e~~~~gek 150 (389)
T COG2232 83 DVDAPIIPFSGFEALRTS-----GELGCEVAGNEPEVKVVEASNKLKFYRKLEVLGMPEPSEK-------KIEPLEEGEK 150 (389)
T ss_pred HCCEEEEECCCCCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH-------HHHHHHHCCE
T ss_conf 324125403553212456-----7545644567827889998888865201010289997043-------2114440210
Q ss_pred HHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 12200023457821688875066899999875432125899816884434201103315777347870236566542113
Q gi|254780268|r 152 PVLVKASAGGGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGERDCSVQR 231 (443)
Q Consensus 152 PviiKp~~gGGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~rhiEvqVl~D~~g~~v~l~erdCSiQr 231 (443)
T Consensus 151 t~IlKPv~GaGG~-~el~~~~Ee~~---------------~~~~i~Qefi~G-~p~Svs~is~g~~-a~~la---~N~Qi 209 (389)
T COG2232 151 TLILKPVSGAGGL-VELVKFDEEDP---------------PPGFIFQEFIEG-RPVSVSFISNGSD-ALTLA---VNDQI 209 (389)
T ss_pred EEEEEECCCCCCE-EEECCCCCCCC---------------CCCEEHHHHCCC-CEEEEEEEECCCC-EEEEE---EEEEE
T ss_conf 1477302378860-13100433458---------------766003343178-4137999735862-38999---70022
Q ss_pred CCCEEEEE---------CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHC
Q ss_conf 56225540---------344558899999999999998865154341024589728834998227654332016788632
Q gi|254780268|r 232 RNQKIWEE---------AHSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYENGQFYFIEMNTRLQVEHPVTEAITG 302 (443)
Q Consensus 232 r~qkiiEe---------aPap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~~~~~yflEvN~Rlqveh~vte~~tg 302 (443)
T Consensus 210 I~~~~~~~~~f~Y~GNlTP~~~~--~~-ee~e~la~elV~~lgL~GsnGVDfvl~d~gpyViEVNPR~qGt~e~iE~s~g 286 (389)
T COG2232 210 IDGLRGEYSQFVYKGNLTPFPYE--EV-EEAERLAEELVEELGLVGSNGVDFVLNDKGPYVIEVNPRIQGTLECIERSSG 286 (389)
T ss_pred ECCCCCCCCCCEECCCCCCCCCH--HH-HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHCC
T ss_conf 14532334441012676777650--26-8999999999998423566661068606885799956854523788898617
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCEECCCCCCCE
Q ss_conf 56201123222102222211333320124533024566221111244215886689984467776023877077768433
Q gi|254780268|r 303 IDLVHEQIYVASENRLSVQQKDITFSGHAIECRINAEDPENFIPNPGEITYFHAPGGLGIRMDSASYQGYTVPSYYDSLI 382 (443)
Q Consensus 303 vdlv~~~~~~a~g~~l~~~~~~i~~~g~aie~Ri~aEdp~~f~Ps~G~i~~~~~p~~~gvRvDt~~~~G~~i~~~yDsml 382 (443)
T Consensus 287 iNl~~lHi~af~G~----LpEr~kpr~~a~krILyap~~-v~v~~l~~~~~~DiP~-----------~Gtviek--gePl 348 (389)
T COG2232 287 INLFRLHIQAFDGE----LPERPKPRGYACKRILYAPRT-VRVPILKLSWTHDIPR-----------PGTVIEK--GEPL 348 (389)
T ss_pred CCHHHHHHHHHCCC----CCCCCCCCEEEEEEEEECCCE-EECCCCCCCCCCCCCC-----------CCCCCCC--CCCE
T ss_conf 77899999984575----767777653477678864523-6613102552113798-----------9822579--9830
Q ss_pred EEEEEECCCHHHHHHHHHHHHH
Q ss_conf 8999955998999999998765
Q gi|254780268|r 383 AKLIVHGKNRKECMMRLNRALN 404 (443)
Q Consensus 383 aKiI~~g~~R~~Ai~~l~~aL~ 404 (443)
T Consensus 349 ~sviA~~nt~~~a~~~~er~~e 370 (389)
T COG2232 349 CSVIASSNTRSGAESMAERLAE 370 (389)
T ss_pred EEEEECCCCHHHHHHHHHHHHH
T ss_conf 4655226877899999999999