HHsearch alignment for GI: 254780268 and conserved domain: PRK10446
>PRK10446 ribosomal protein S6 modification protein; Provisional.
Probab=99.86 E-value=2.4e-19 Score=157.78 Aligned_cols=272 Identities=21% Similarity=0.242 Sum_probs=186.4
Q ss_pred EEEEECCCHH---HHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHCCCCEEEC
Q ss_conf 6866447099---9999998888096599985855771877675857999189985300069899999998709989945
Q gi|254780268|r 4 KILIANRGEI---ALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSYLNIQQIVAACEVTGADAIHP 80 (443)
Q Consensus 4 ~iLianrGei---a~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~~~~sYldi~~ii~~a~~~~~daihP 80 (443)
T Consensus 2 ki~iLs~~~~~yst~RL~eaa~~rGh~v~vi--dp~~~~~~i~~~~~~v---------~~~g~-------~L~~~Davip 63 (300)
T PRK10446 2 KIAILSRDGTLYSCKRLREAAIQRGHLVEIL--DPLSCYMNINPAASSI---------HYKGR-------KLPHFDAVIP 63 (300)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCEEEEE--EHHHCEEEECCCCCEE---------EECCE-------ECCCCCEEEE
T ss_conf 7999936997607999999999879959996--1489189824898649---------98980-------8687888998
Q ss_pred CCCHHH--CCHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC-CCHHHHHC
Q ss_conf 853131--097666889845921626898999872189988776642244332433345579998732003-30122000
Q gi|254780268|r 81 GYGFLS--ENAKFAEILEDHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVPGSGEVYPHTAMPIAKEI-GFPVLVKA 157 (443)
Q Consensus 81 GyGfLs--En~~fa~~~e~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p~~~~~~~~ea~~~a~~i-GyPviiKp 157 (443)
T Consensus 64 R~g~~~t~~~~~vLr~lE~~Gv~vi-N~~~aI~~~~DKl~t~qlL~~~gip~P~T~~~~~~~~~~~~i~~~gg~PvViKp 142 (300)
T PRK10446 64 RIGTAITFYGTAALRQFEMLGSYPL-NESVAIARARDKLRSMQLLARQGIDLPVTGIAHSPDDTSDLIDMVGGAPLVVKL 142 (300)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCEE-CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHCCCCEEEEE
T ss_conf 2677745589999999998899186-489999985769999999987597999889836999999999980899789996
Q ss_pred CCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE--EECCEEEEEECCCCCCCCCCCCC---CCCC-
Q ss_conf 23457821688875066899999875432125899816884434201--10331577734787023656654---2113-
Q gi|254780268|r 158 SAGGGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENP--RHIEVQIFGDGMGNAIHFGERDC---SVQR- 231 (443)
Q Consensus 158 ~~gGGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~--rhiEvqVl~D~~g~~v~l~erdC---SiQr- 231 (443)
T Consensus 143 l~Gs~G~GV~l~e~~~~~~~i~~~~~~~------~~~~~iQeyI~~~~g~D~Rv~vvgg---~vvaam~R~~~~g~~rtN 213 (300)
T PRK10446 143 VEGTQGIGVVLAETRQAAESVIDAFRGL------NAHILVQEYIKEAQGCDIRCLVVGD---EVVAAIERRAKEGDFRSN 213 (300)
T ss_pred CCCCCCCCEEEEECHHHHHHHHHHHHHC------CCCEEEEEECCCCCCCCEEEEEECC---EEHHHEEEECCCCCEEEE
T ss_conf 7898860369973789999999988622------8737752202555798679999998---624438997378834777
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHH
Q ss_conf 56225540344558899999999999998865154341024589728834998227654332016788632562011232
Q gi|254780268|r 232 RNQKIWEEAHSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYENGQFYFIEMNTRLQVEHPVTEAITGIDLVHEQIY 311 (443)
Q Consensus 232 r~qkiiEeaPap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~~~~~yflEvN~Rlqveh~vte~~tgvdlv~~~~~ 311 (443)
T Consensus 214 ~~~Gg-~~~~~-~l~~e~----~~la~~a~~~lgl-~~~GVDii~~~~g~~v~EVN~~--Pg~~gi~~~tgvdiA~~Ii~ 284 (300)
T PRK10446 214 LHRGG-AASVA-SITPQE----REIAIKAARTMAL-DVAGVDILRANRGPLVMEVNAS--PGLEGIEKTTGIDIAGKMIR 284 (300)
T ss_pred EECCC-EEEEC-CCCHHH----HHHHHHHHHHHCC-CEEEEEEEEECCCCEEEEECCC--HHHHHHHHHHCCCHHHHHHH
T ss_conf 70397-76532-899999----9999999998699-6899999882899889999387--42788988759898999999
Q ss_pred H
Q ss_conf 2
Q gi|254780268|r 312 V 312 (443)
Q Consensus 312 ~ 312 (443)
T Consensus 285 ~ 285 (300)
T PRK10446 285 W 285 (300)
T ss_pred H
T ss_conf 9