HHsearch alignment for GI: 254780268 and conserved domain: PRK12767
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional.
Probab=100.00 E-value=4e-42 Score=319.54 Aligned_cols=289 Identities=20% Similarity=0.319 Sum_probs=243.3
Q ss_pred CEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHCCCCEEECC
Q ss_conf 70686644709999999988880965999858557718776758579991899853000698999999987099899458
Q gi|254780268|r 2 ISKILIANRGEIALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSYLNIQQIVAACEVTGADAIHPG 81 (443)
Q Consensus 2 ~~~iLianrGeia~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~~~~sYldi~~ii~~a~~~~~daihPG 81 (443)
T Consensus 1 m~nILvt~~G~-~~~ii~~lk~~~~~~~Vi~~D~~~~a~~~~~aD~~y~~P~~-~d~~y--~~~ll~i~~~~~id~iiP~ 76 (325)
T PRK12767 1 MMNILVTSAGR-RVQLVKALKKSLLGGKVIGADISPLAPALYFADKFYVVPKV-TDPNY--IDALLDICKKENIDALIPL 76 (325)
T ss_pred CCEEEEECCCC-HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHCCEEEECCCC-CCHHH--HHHHHHHHHHHCCCEEEEC
T ss_conf 94899986786-89999999976998599996899899534454889987888-98789--9999999998799999977
Q ss_pred CC----HHHCCHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHH-HHHHCCCCHHHHH
Q ss_conf 53----131097666889845921626898999872189988776642244332433345579998-7320033012200
Q gi|254780268|r 82 YG----FLSENAKFAEILEDHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVPGSGEVYPHTAM-PIAKEIGFPVLVK 156 (443)
Q Consensus 82 yG----fLsEn~~fa~~~e~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p~~~~~~~~ea~-~~a~~iGyPviiK 156 (443)
T Consensus 77 ~d~El~~la---~~~~~l~~~gi~v~~~~~e~i~~~~DK~~~~~~l~~~gip~P~t~~~~~~~~~~~~~~~~~~fP~vvK 153 (325)
T PRK12767 77 IDPELPLLA---QHRDEFKEIGVKVLVSSKEVIEICNDKWLTYEFLKENGINTPKSYLPEDLEDLLKALAEELGFPLIVK 153 (325)
T ss_pred CCHHHHHHH---HHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 850266899---99999996799895697999998549999999999759998982055899999999986569966985
Q ss_pred CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 02345782168887506689999987543212589981688443420110331577734787023656654211356225
Q gi|254780268|r 157 ASAGGGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGERDCSVQRRNQKI 236 (443)
Q Consensus 157 p~~gGGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~rhiEvqVl~D~~g~~v~l~erdCSiQrr~qki 236 (443)
T Consensus 154 P~~g~gs~Gv~~i~~~~el~~~~~~----------~~~~ivqe~i~G-~E~tvdv~~d~~g~~~~~------~~~~r~~~ 216 (325)
T PRK12767 154 PRDGSGSIGVFKVNNREELEFLLRY----------NPNLIIQEFIEG-QEYTVDVLCDLNGEVISI------VPRKRIEV 216 (325)
T ss_pred ECCCCCCCCEEEECCHHHHHHHHHH----------CCCEEEEECCCC-CEEEEEEEEECCCCEEEE------EEEEECCC
T ss_conf 3567887754997999999999974----------897498703489-889999999789999999------99873364
Q ss_pred E--EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHH
Q ss_conf 5--40344558899999999999998865154341024589728834998227654332016788632562011232221
Q gi|254780268|r 237 W--EEAHSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYENGQFYFIEMNTRLQVEHPVTEAITGIDLVHEQIYVAS 314 (443)
Q Consensus 237 i--EeaPap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~~~~~yflEvN~Rlqveh~vte~~tgvdlv~~~~~~a~ 314 (443)
T Consensus 217 ~~G~~~~~~~~~---~~~l~~~~~~i~~~l~~~G~~~vq~~~~~g~~~iiEiNPRf~g~~~l~-~~aG~n~p~~~~~~~l 292 (325)
T PRK12767 217 RAGETSKGVTVK---NPELFKLAERIAEKLGARGPLNIQCFVVDGEPYLFEINPRFGGGYPLR-AMAGFNEPDILIRNLL 292 (325)
T ss_pred CCCCCCCCEECC---HHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEECCCCCCHHHH-HHHCCCHHHHHHHHHC
T ss_conf 457867753057---999999999999981985459999999899699999978878646739-8839899999999984
Q ss_pred CCCC
Q ss_conf 0222
Q gi|254780268|r 315 ENRL 318 (443)
Q Consensus 315 g~~l 318 (443)
T Consensus 293 g~~~ 296 (325)
T PRK12767 293 GGEN 296 (325)
T ss_pred CCCC
T ss_conf 9998