>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase; InterPro: IPR004549 This family represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase (6.4.1.2 from EC) is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase (6.3.4.14 from EC), and two subunits of carboxyl transferase in a 2:2 complex. In the first step of long-chain fatty acid synthesis, biotin carboxylase catalyses the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-coA. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase). In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.; GO: 0016874 ligase activity.

Probab=100.00 E-value=0 Score=1387.34 Aligned_cols=441 Identities=63% Similarity=1.049 Sum_probs=435.3 Q ss_pred CCEEEEEECCCHHHHHHHHHHHHCCCEEEEECCCHHHCCCCHHHCCEEEECCCCCCCCHHCCHHHHHHHHHHCCCCEEEC Q ss_conf 97068664470999999998888096599985855771877675857999189985300069899999998709989945 Q gi|254780268|r 1 MISKILIANRGEIALRILRACKELGIPTVAVHSTADSGAMHVRLADESVCIGPPSSKDSYLNIQQIVAACEVTGADAIHP 80 (443) Q Consensus 1 m~~~iLianrGeia~riira~~elGi~tv~v~s~~D~~a~~~~~ADe~~~i~~~~~~~sYldi~~ii~~a~~~~~daihP 80 (443) T Consensus 1 ~~~K~lIANRGEIA~RIiRAC~ElGi~TVAVyS~aD~dalHV~LADEavCIGea~S~kSYL~IpnI~aAA~~tG~~AiHP 80 (451) T TIGR00514 1 MLDKILIANRGEIALRIIRACKELGIATVAVYSTADRDALHVLLADEAVCIGEAPSAKSYLNIPNIIAAAEITGADAIHP 80 (451) T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCCEECC T ss_conf 98548995260678899998886498639860044133234343025300686221124411588999887748807628 Q ss_pred CCCHHHCCHHHHHHHHHCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCCCCCC-C--CHHHHHHHHHCCCCHHHHHC Q ss_conf 85313109766688984592162689899987218998877664224433243334-5--57999873200330122000 Q gi|254780268|r 81 GYGFLSENAKFAEILEDHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVPGSGE-V--YPHTAMPIAKEIGFPVLVKA 157 (443) Q Consensus 81 GyGfLsEn~~fa~~~e~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p~~~~-~--~~~ea~~~a~~iGyPviiKp 157 (443) T Consensus 81 GYGFLSENA~FAe~c~~~g~~FIGP~pe~Ir~MGDK~~A~~~mKkaGVP~VPGS~GP~~~~~~e~~~~A~~IGyPv~IKA 160 (451) T TIGR00514 81 GYGFLSENADFAEICEDHGITFIGPSPEAIRLMGDKVTAKETMKKAGVPVVPGSDGPLVEDEEEAVRIAKEIGYPVIIKA 160 (451) T ss_pred CCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHCCCCEEEEE T ss_conf 87734431247889873882666787120112688689999997488766238888631027889999974789689996 Q ss_pred CCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCEEE Q ss_conf 23457821688875066899999875432125899816884434201103315777347870236566542113562255 Q gi|254780268|r 158 SAGGGGRGMRIAYSENDLSEAIDQARSEALAAFGNDAVYIEKYLENPRHIEVQIFGDGMGNAIHFGERDCSVQRRNQKIW 237 (443) Q Consensus 158 ~~gGGG~Gi~vv~~~~el~~a~~~a~~ea~~~fgd~~vlvEk~i~~~rhiEvqVl~D~~g~~v~l~erdCSiQrr~qkii 237 (443) T Consensus 161 ~AGGGGRGmR~vR~~~El~~~~~~a~~EA~AAF~N~~VYiEKfienPRH~E~QVLAD~~GN~vyLgERDCSiQRR~QKll 240 (451) T TIGR00514 161 TAGGGGRGMRVVREEDELVKLIKAARAEAAAAFNNDGVYIEKFIENPRHVEIQVLADKYGNVVYLGERDCSIQRRNQKLL 240 (451) T ss_pred ECCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHCCCCCEE T ss_conf 25899722588628689999999999999740287962786333699407999875178887897121462000465446 Q ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-CCC-EEEEECCCCCCCCCHHHHHHHCCCCHHHHHHHHHC Q ss_conf 4034455889999999999999886515434102458972-883-49982276543320167886325620112322210 Q gi|254780268|r 238 EEAHSPVISAQDRTEIGETCVKAMKKIDYRGAGTIEFLYE-NGQ-FYFIEMNTRLQVEHPVTEAITGIDLVHEQIYVASE 315 (443) Q Consensus 238 EeaPap~l~~~~~~~i~~~A~~~~~~~g~~g~~tvEFl~~-~~~-~yflEvN~Rlqveh~vte~~tgvdlv~~~~~~a~g 315 (443) T Consensus 241 EEaPsP~Lt~ElR~~~G~~Av~aA~~iGY~GaGTvEFLld~~~~rFYFmEMNTRIQVEHPVTEmvtGvDL~keQirvA~G 320 (451) T TIGR00514 241 EEAPSPALTSELREKMGDAAVKAAKSIGYTGAGTVEFLLDKNGQRFYFMEMNTRIQVEHPVTEMVTGVDLIKEQIRVAAG 320 (451) T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHCCCEECCEEEEEEECCCCEEEEEEECCEEEEEECCEEEEECHHHHHHHHHHHCC T ss_conf 54688877889999998999999986498003516888625887357765176021110320146002578889987378 Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCC-CCCCCCCCCEEEEECCCCCCEEEECCCCCCCEECCCCCCCEEEEEEECCCHHH Q ss_conf 22222113333201245330245662-21111244215886689984467776023877077768433899995599899 Q gi|254780268|r 316 NRLSVQQKDITFSGHAIECRINAEDP-ENFIPNPGEITYFHAPGGLGIRMDSASYQGYTVPSYYDSLIAKLIVHGKNRKE 394 (443) Q Consensus 316 ~~l~~~~~~i~~~g~aie~Ri~aEdp-~~f~Ps~G~i~~~~~p~~~gvRvDt~~~~G~~i~~~yDsmlaKiI~~g~~R~~ 394 (443) T Consensus 321 ~~L~~kQe~v~~~GHaieCRINAEDP~~~F~PsPG~i~~ylpPGG~gVR~DSh~Y~gY~iPPyYDSmIaKlI~~G~~R~~ 400 (451) T TIGR00514 321 EKLSLKQEDVKLRGHAIECRINAEDPIKNFLPSPGRITSYLPPGGPGVRVDSHVYSGYTIPPYYDSMIAKLITYGKTREE 400 (451) T ss_pred CCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEECCCCCCCCCCHHCCEEEEECCCCHHH T ss_conf 95664311479998899865145587877868885015546879752201003448787698402020124640589889 Q ss_pred HHHHHHHHHHHCEECCCCCCHHHHHHHHCCHHHHCCCCCHHHHHHHC Q ss_conf 99999987654088263778889998968988955886531687510 Q gi|254780268|r 395 CMMRLNRALNEIIIDGIKTTIPLFQKLIKNEDIIEGNYDIHWLENKY 441 (443) Q Consensus 395 Ai~~l~~aL~~~~I~Gv~TN~~~l~~il~~~~f~~g~~~T~fi~~~~ 441 (443) T Consensus 401 AI~rMKrAL~E~~I~G~~TtI~fH~~iL~~e~F~~G~~~~~f~~~~~ 447 (451) T TIGR00514 401 AIARMKRALSEFIITGIKTTIPFHQRILENENFLSGGVNIKFLEKKL 447 (451) T ss_pred HHHHHHHHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHH T ss_conf 99999887542220771058468988627865224873379998774

HHsearch alignment for GI: 254780268 and conserved domain: TIGR00514