HHsearch alignment for GI: 254780268 and conserved domain: pfam06849

>pfam06849 DUF1246 Protein of unknown function (DUF1246). This family represents the N-terminus of a number of hypothetical archaeal proteins of unknown function.

Probab=95.80  E-value=0.062  Score=34.09  Aligned_cols=109  Identities=19%  Similarity=0.273  Sum_probs=66.2

Q ss_pred             HHHHHHHHHHHCCCEEEEECCCHHHCC--CCHHHCCEEEECCCCCCCCHHCCHH--HHHHHHHHCCCCEEECCCCHHHCC
Q ss_conf             999999988880965999858557718--7767585799918998530006989--999999870998994585313109
Q gi|254780268|r   13 IALRILRACKELGIPTVAVHSTADSGA--MHVRLADESVCIGPPSSKDSYLNIQ--QIVAACEVTGADAIHPGYGFLSEN   88 (443)
Q Consensus        13 ia~riira~~elGi~tv~v~s~~D~~a--~~~~~ADe~~~i~~~~~~~sYldi~--~ii~~a~~~~~daihPGyGfLsEn   88 (443)
T Consensus         8 SALqIl~GAK~EGF~Tv~vc~~-gr~~~Y~~f~~~De~iv~d------~f~di~~~~~q~~L~~~N~I~IPhgS--fv~Y   78 (124)
T pfam06849         8 SALQILDGAKDEGFRTVAVCQK-GREKFYRRFPFVDEFIVVD------KFKDILDEEVQQKLRENNAIFIPHGS--FVAY   78 (124)
T ss_pred             HHHHHHHHHHHCCCCEEEEEEC-CCCCHHHHCCCCCEEEEEC------CHHHHHHHHHHHHHHHCCEEEECCCC--EEEE
T ss_conf             3989972388739957899817-9752133268673799956------58998729999999988979974888--4676


Q ss_pred             HHHHHHHH-HCCCEEECCCHHHHHHHHCHHHHHHHHHHCCCCCCC
Q ss_conf             76668898-459216268989998721899887766422443324
Q gi|254780268|r   89 AKFAEILE-DHHIKFIGPSSEHIKIMGDKITAKKTAQQLGIPVVP  132 (443)
Q Consensus        89 ~~fa~~~e-~~Gi~fIGPs~~ai~~~gDK~~~k~~a~~~GVP~~p  132 (443)
T Consensus        79 ~G-~~~ie~~~~VP~FG-NR~lLrwEseR~~~~~lLe~Agi~~Pk  121 (124)
T pfam06849        79 VG-YDRVENEFKVPIFG-NRNLLRWESERDKERKLLEKAGIRYPK  121 (124)
T ss_pred             EC-HHHHHHCCCCCEEC-CHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             55-89986027887004-788888765367799999976999983