HHsearch alignment for GI: 254780268 and conserved domain: smart00878
>smart00878 Biotin_carb_C Biotin carboxylase C-terminal domain. Biotin carboxylase is a component of the acetyl-CoA carboxylase multi-component enzyme which catalyses the first committed step in fatty acid synthesis in animals, plants and bacteria. Most of the active site residues reported in reference are in this C-terminal domain.
Probab=100.00 E-value=6.2e-35 Score=268.49 Aligned_cols=106 Identities=56% Similarity=1.054 Sum_probs=104.5
Q ss_pred HHHCCCCCC-CCCCCCCCCEEEEECCCCCCEEEECCCCCCCEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCEECCC
Q ss_conf 330245662-2111124421588668998446777602387707776843389999559989999999987654088263
Q gi|254780268|r 333 ECRINAEDP-ENFIPNPGEITYFHAPGGLGIRMDSASYQGYTVPSYYDSLIAKLIVHGKNRKECMMRLNRALNEIIIDGI 411 (443)
Q Consensus 333 e~Ri~aEdp-~~f~Ps~G~i~~~~~p~~~gvRvDt~~~~G~~i~~~yDsmlaKiI~~g~~R~~Ai~~l~~aL~~~~I~Gv 411 (443)
T Consensus 1 E~Ri~AEdp~~~F~P~~G~i~~~~~p~~~gvRvDt~~~~G~~vs~~YDpmiAKlI~~g~~R~~Ai~~l~~aL~~~~i~Gi 80 (107)
T smart00878 1 ECRINAEDPANGFLPSPGRITRYRFPGGPGVRVDSGVYEGYEVPPYYDSMIAKLIVHGETREEAIARLRRALDEFRIEGV 80 (107)
T ss_pred CCEEEEECCCCCEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCEECCC
T ss_conf 93997465999901698896899858999889985431788458540269999998076699999999998862675173
Q ss_pred CCCHHHHHHHHCCHHHHCCCCCHHHHH
Q ss_conf 778889998968988955886531687
Q gi|254780268|r 412 KTTIPLFQKLIKNEDIIEGNYDIHWLE 438 (443)
Q Consensus 412 ~TN~~~l~~il~~~~f~~g~~~T~fi~ 438 (443)
T Consensus 81 ~TN~~~L~~il~~~~f~~g~~~T~~ld 107 (107)
T smart00878 81 KTNIPFLRALLRHPDFRAGDVDTGFLE 107 (107)
T ss_pred CCCHHHHHHHHCCHHHCCCCCCCCCCC
T ss_conf 644999999978830236996044619